Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1140 GTCACTGGCAAGGCAGTAATGCTAGATGAAATCATCAACTATGTACAATCACTTCAGAGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCGCGGCTGGAATTTAATATTGAAGGACTTCTTGGAAAAGATATTCTTCAACATCGTCCCGGTCCTTCTTCTGGAATAGGGTTTCCTCTAGATATATCCATGGCTTTTCCTCCTATACATCCATCTCAACCAGGGCTGATTCATCCTATTATTCCCAACATGGTAAACTCAGCTGACATTCTTCAAAGAAACATCCATCAACAGTTAGCTCCCTTGAATAGTGGGTTCAAGGAGCCAAATCAGCTATCGGATGTATGGGAGGATGAGCTTCACAACGTCGTACAGATGAGTTTTGCAACAACTGCTCCCCTCAGTAACCAAGATGTCGATGGTACTGTGTCAGCAAGTCAGATGAAAGTTGAACTTTGA 468 0.4209 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLEFNIEGLLGKDILQHRPGPSSGIGFPLDISMAFPPIHPSQPGLIHPIIPNMVNSADILQRNIHQQLAPLNSGFKEPNQLSDVWEDELHNVVQMSFATTAPLSNQDVDGTVSASQMKVEL* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1140 155 PANTHER BHLH TRANSCRIPTION FACTOR 1 154 - -
Pvu2g1140 155 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 154 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1140 Pvu-Chr2 22463600 22465619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1140 1 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 54.135 3.11e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1140 - - pvu:PHAVU_002G1105001 310.842