Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1129 ATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGAGGATGGTGGCAGTGGAAAAGGGGGCTTTCTTAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGACCTGCCCCAACTAATGCTGCTCCTCCTTGGAAACCTGATCAAGATCCTATTCATACCAAGTATTCCAACATTTCTTCTACAGGGATCTCTTCTGCATCATCTTCTTCTGTTGAGATGATTACTGTCGGGCAGATGGGGAATTATGGCTATGGTTCTGTACCCATGGAGAAAAGTTTTAGGGACTGTTCAATATCTGCTGGGGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGGTTGGTGTTGATCCTTATTCCTCAGCCTACGCCAACTTCTTTGATAAAATAAGGCCAAATGAAGAAACCCTGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAGGAGGATGGGGGTGCTGAGATTGAAACTCTCCCTTTATTCCCTATGCACGGCGAGGACATTCATGGCTACTGCAACCTGAAGTCTAATTCTTACAACTATGATGGAAACGGGTGGTATCATTCTGAAGACGGGTTCAAGAATGGTTCTCGTGCTTCTTTGGAGCTCAGTCTGAACTCCTACACTCGCAGATCTCCAGATTTCGCTTAA 864 0.456 MEPQQPQGSQPNEDGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRPAPTNAAPPWKPDQDPIHTKYSNISSTGISSASSSSVEMITVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWVGVDPYSSAYANFFDKIRPNEETLEEEEEEEEEEEEEDGGAEIETLPLFPMHGEDIHGYCNLKSNSYNYDGNGWYHSEDGFKNGSRASLELSLNSYTRRSPDFA* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1129 287 CDD homeodomain 29 91 IPR001356 GO:0003677
Pvu2g1129 287 ProSiteProfiles 'Homeobox' domain profile. 24 90 IPR001356 GO:0003677
Pvu2g1129 287 MobiDBLite consensus disorder prediction 88 116 - -
Pvu2g1129 287 SMART HOX_1 26 94 IPR001356 GO:0003677
Pvu2g1129 287 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 280 IPR044555 GO:0003700|GO:0099402
Pvu2g1129 287 PANTHER PROTEIN WUSCHEL 1 280 - -
Pvu2g1129 287 SUPERFAMILY Homeodomain-like 22 96 IPR009057 -
Pvu2g1129 287 Gene3D - 23 89 - -
Pvu2g1129 287 MobiDBLite consensus disorder prediction 1 34 - -
Pvu2g1129 287 MobiDBLite consensus disorder prediction 205 225 - -
Pvu2g1129 287 Coils Coil 200 227 - -
Pvu2g1129 287 Pfam Homeodomain 28 89 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1129 Pvu-Chr2 22166372 22168235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1129 22 238 Wox Gene Family AT2G17950 45.455 3.41e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu2g1129 Homeodomain 1.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1129 - - vra:106776674 500.36