Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1121 ATGATTTCTTCTGTGGCCTTTCAACCGTCTCTTCCAGCCGTAAACTTCTCCGGTAAAGTTCTCGCCTCGCCGCCCTGTCGCGTTAGATCCCGCCCAATAGTCGCCTTCGCCACCGCCACCGCCACCGCCACTTCAACCGAGGAAGCTCGCTCTTCCTGGACGGAGAAACCACGCCCTTCCTATCTCAACTCCTCTTGCTCTTCCCTCTACGATATTCTCGGCATCCCCGCCGGTGCCTCCAGCCAGGAAATCAAGGCCGCGTACCGGCGACTGGCCAGAGTCTGCCACCCGGACGTGGCGGCGATCGACCGGAAAAACTCCTCCGCGGACGAATTTATGAAGATCCACGCCGCCTACTCCACTCTCTCGGATCCTGACAAACGCGCCAACTACGACCGGAGCCTGTTCAGGCGACAACGGCCGCTGTCTACTGCGGCGGTGTTCTCGGGCTACACGCGCCGGAACTGGGAAACAGATCAGTGCTGGTAG 489 0.6033 MISSVAFQPSLPAVNFSGKVLASPPCRVRSRPIVAFATATATATSTEEARSSWTEKPRPSYLNSSCSSLYDILGIPAGASSQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSTAAVFSGYTRRNWETDQCW* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1121 162 CDD DnaJ 70 124 IPR001623 -
Pvu2g1121 162 SMART dnaj_3 67 127 IPR001623 -
Pvu2g1121 162 Gene3D DnaJ domain 59 154 IPR036869 -
Pvu2g1121 162 SUPERFAMILY Chaperone J-domain 65 138 IPR036869 -
Pvu2g1121 162 PRINTS DnaJ domain signature 70 88 IPR001623 -
Pvu2g1121 162 PRINTS DnaJ domain signature 88 103 IPR001623 -
Pvu2g1121 162 PRINTS DnaJ domain signature 107 127 IPR001623 -
Pvu2g1121 162 PANTHER - 1 162 - -
Pvu2g1121 162 ProSiteProfiles dnaJ domain profile. 68 135 IPR001623 -
Pvu2g1121 162 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 162 - -
Pvu2g1121 162 Pfam DnaJ domain 69 132 IPR001623 -
Pvu2g1121 162 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1121 Pvu-Chr2 21966015 21967589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1121 70 132 C2H2 Transcription Factor Family AT1G74250 41.791 4.32e-08 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1121 2 21966015 21967589 Pvu2g1121 2 21966015 21967589 ECH
Pvu2g1121 2 21966015 21967589 Pvu3g2690 3 48926557 48927012 PCT