Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1112 ATGGCATTTTCGGTGGCCCAGTTACCTCGTTGGTCGGTTTTTCTTCTTTTGCTTCTTGTCTTTTGTAGCTCAGGAGCAAAGGTTGTCACCATTGATGTGCGCGCAGCCAAGGATCTTATCGAGACCGGTTCCATTTATCTTGATGTTAGGACGGTGGAAGAATTCTTGAAAGGGCATGTGGATGCAGTTAATATCGTTAACATTCCATACATGTTGAATACATCTAAGGGGAGGGCAGGCAAGGTAATGAATCCAGATTTTCTGAAAGAGGTTTCCTTGGCTTGTAACAAAGAAGATCATCTCATTGTGGGTTGTCAAACTGGGGGGAGATCTTTGTATGCAACTGCTGCTCTTCTGTCTGATGGTTTTAAGAATGTGAAGGACATGGGAGGTGGTTATGCGGAATGGAGTCAAAACAAGTTTGCAGTGAAGATACCATTAGCCAAAGAGGAGCTATAA 459 0.4357 MAFSVAQLPRWSVFLLLLLVFCSSGAKVVTIDVRAAKDLIETGSIYLDVRTVEEFLKGHVDAVNIVNIPYMLNTSKGRAGKVMNPDFLKEVSLACNKEDHLIVGCQTGGRSLYATAALLSDGFKNVKDMGGGYAEWSQNKFAVKIPLAKEEL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1112 152 CDD RHOD 36 136 - -
Pvu2g1112 152 Pfam Rhodanese-like domain 36 138 IPR001763 -
Pvu2g1112 152 PANTHER THIOSULFATE SULFURTRANSFERASE 18 15 151 IPR044684 GO:0003824
Pvu2g1112 152 PANTHER THIOSULFATE SULFURTRANSFERASE 18 15 151 - -
Pvu2g1112 152 SMART rhod_4 31 142 IPR001763 -
Pvu2g1112 152 Gene3D - 20 144 IPR036873 -
Pvu2g1112 152 ProSiteProfiles Rhodanese domain profile. 45 145 IPR001763 -
Pvu2g1112 152 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 139 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1112 Pvu-Chr2 21777622 21778893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1112 14 145 Sulfurtransferasese or Rhodanese AT2G17850 41.860 8.89e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1112 - K15692 gmx:100815122 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1112 2 21777622 21778893 Pvu2g1112 2 21777622 21778893 ECH
Pvu2g1112 2 21777622 21778893 Pvu3g2719 3 49145190 49147687 PCT