LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g1097	ATGAAGTTTCTCTTCCAAAACCTTCTTTCTCATCTGCCTTTAATCATTCTTTGGTCTTTTGCCATTGTTACTCAACATACCAGTGTTGTGAGTCTTCCAAACAATGAAACTGTTCCAGCAGTTATTGTGTTTGGAGACTCCATTGTAGATACAGGTAACAACAACTACATCACCACCATATTCAAATGCAATTTCCAACCATATGGTAAAGATTTTGGTGGAGGGAATCAACCATCGGGGAGGTTCAGCAATGGTATAACCCCATCAGACATCATTGCTTCAAAATTTGGAGTAAAAAAGATTTTGCCACCTTATCTTGATCCAAAACTACAACCTCAAGATCTTCTCACAGGAGTAAGCTTTGCATCTGGTGGTTCTGGATATGATCCTCTAACCTCTAAATCAGCTTCTGTGCTATCATTGGCAGATCAATTGGAGAAGTTCAGAGAATACAAAAGCAAGATAGAGAAAATAGTTGGAGAAGATAGAACAAGCACAATAATGTCAAAAAGCATATACATATTGTGCACAGGAAGTAATGACATTGCCAATACTTACTCTCTATCACCAATTAGGCGAGCACATTATGACATTTCTTCATACACCGACTTAATGACTTCAGAAGCCACAAACTTCTTGCAGGAACTTTATGGACTTGGAGGTAGAAGGATCGGAGTAATTGGTTTACCAGCTCTAGGATGTGTGCCCTCGCAGAGAACAATTAGAGGAGGCTTACAGAGAAATTGTTCATATTCTGAGAACCAAGCAGCAATGCTCTTCAATACAAAACTCTCATCTCAAATAGATGCACTTAATAAAAAAAATTCAGAAGCTAGACTTGTCTACCTTGATATTTACAACCCTTTGCTCAACATGATTCAAAATCCTGCAACATATGGTTTCGAAGTAGCAAACAAAGGATGCTGTGGCACGGGAAATATTGAAGCAGGCATACTTTGCAACAGTTTCACCCTACACATATGTTCAAATACCAAAAGCTACATTTTTTGGGACAGTTTCCATCCTACCCAAGAGGCATATAATGTGCTTTGTTCTCAGGTGTTTGACAACAAAATCAAGGACTTCTTCTGA	1092	0.3855	MKFLFQNLLSHLPLIILWSFAIVTQHTSVVSLPNNETVPAVIVFGDSIVDTGNNNYITTIFKCNFQPYGKDFGGGNQPSGRFSNGITPSDIIASKFGVKKILPPYLDPKLQPQDLLTGVSFASGGSGYDPLTSKSASVLSLADQLEKFREYKSKIEKIVGEDRTSTIMSKSIYILCTGSNDIANTYSLSPIRRAHYDISSYTDLMTSEATNFLQELYGLGGRRIGVIGLPALGCVPSQRTIRGGLQRNCSYSENQAAMLFNTKLSSQIDALNKKNSEARLVYLDIYNPLLNMIQNPATYGFEVANKGCCGTGNIEAGILCNSFTLHICSNTKSYIFWDSFHPTQEAYNVLCSQVFDNKIKDFF*	364

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu2g1097	363	Gene3D	SGNH hydrolase	26	359	IPR036514	-
Pvu2g1097	363	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE	2	362	-	-
Pvu2g1097	363	CDD	SGNH_plant_lipase_like	39	357	IPR035669	-
Pvu2g1097	363	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	41	52	IPR008265	GO:0006629\|GO:0016298
Pvu2g1097	363	PANTHER	GDSL ESTERASE/LIPASE EXL3	2	362	-	-
Pvu2g1097	363	SUPERFAMILY	SGNH hydrolase	172	355	-	-
Pvu2g1097	363	Pfam	GDSL-like Lipase/Acylhydrolase	41	350	IPR001087	GO:0016788

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g1097	Pvu-Chr2	21416262	21419096	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g1097	35	354	Pollen Coat Proteome	AT1G75910	37.461	3.94e-71	224

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g1097	-		-	gmx:100810354	604.364

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g1097	2	21416262	21419096	Pvu3g2732	3	49235956	49237835	PCT

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