Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1080 ATGGGTGAAGTTGACGAGGAGTATCTCAGTGAAATTGAGATGGCTCGACGCCAACTTCGTTCTTTCATCACCAATAACAAATGCGCCCCTCTCATGCTTCAACTAGCGTGGAACGATGCTGCAACCGGAGGCCCCAATGCTTCTATTAGATTCATTACTAAACACGAAGCATTCAAGGATTTGGAAAAAGCAGTTGAATACTGTGAAATAGTGAAGGCCAAACTTAAGCTTAAGAAAGTTTCATACGCAGACCTTTACCAGCTTGCTGGTGTTGTTGCAATCGAGGTCACTCAGGGTCCAACTATTGACTTTGTTCCCGGCAGAAAGGATTTAAATGAATCTCCACGAGTTCAAATACGCTTTCTAAATGGTGAAGAAGATGCAAGGAGTTTAAGGAGAAAATTTTCTCGCATGGGACTAAGTGAAGACAAAGACATTGTAGTTCTATGTGGAGGCCACACTTTGACAAGAAGTATGTATCCAAAAGTACCAATGAGAGAGACACCTGAGGGTGAGACGCATAAAGATAGCTCTAAGTTTGACGAAAGGAAATGGACAAAGGACCCTTTGAAGTTTGATAACTCCTATTTTAAGGAACTATTGAGCAAGGGTGCATCTTTTTCGAGGCTTCCCATCGACAATGCTTTAGTAGAGGATCAAATATTTCGTCACTATGTTGAACGGTACGCAAAGGATGAGGATATTTTTTTCAAAGAATATGCAATTTCACATAAGAAACTCTCTGAGCTGGGCTTCGATCCCAAGAAGCTAAATCAGGACAAGGGACTATGTCAGAAGCTAAATCAGCACAAGGGACTTGTAGGAATTGGTATGATATCAGTTGTGCTGACCGCAATATTAGGTTACTTACATAAGAAGAAGAAAAATCAATTGAAAAATTGA 903 0.4064 MGEVDEEYLSEIEMARRQLRSFITNNKCAPLMLQLAWNDAATGGPNASIRFITKHEAFKDLEKAVEYCEIVKAKLKLKKVSYADLYQLAGVVAIEVTQGPTIDFVPGRKDLNESPRVQIRFLNGEEDARSLRRKFSRMGLSEDKDIVVLCGGHTLTRSMYPKVPMRETPEGETHKDSSKFDERKWTKDPLKFDNSYFKELLSKGASFSRLPIDNALVEDQIFRHYVERYAKDEDIFFKEYAISHKKLSELGFDPKKLNQDKGLCQKLNQHKGLVGIGMISVVLTAILGYLHKKKKNQLKN* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1080 300 SUPERFAMILY Heme-dependent peroxidases 13 257 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 Gene3D Peroxidase, domain 2 122 244 - -
Pvu2g1080 300 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 294 IPR044831 GO:0004601|GO:0034599
Pvu2g1080 300 Gene3D - 15 251 - -
Pvu2g1080 300 PRINTS Haem peroxidase superfamily signature 29 43 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PRINTS Haem peroxidase superfamily signature 80 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PRINTS Haem peroxidase superfamily signature 98 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PRINTS Haem peroxidase superfamily signature 145 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 ProSiteProfiles Plant heme peroxidase family profile. 29 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 Pfam Peroxidase 17 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PRINTS Plant ascorbate peroxidase signature 8 28 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PRINTS Plant ascorbate peroxidase signature 29 44 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PRINTS Plant ascorbate peroxidase signature 177 201 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PRINTS Plant ascorbate peroxidase signature 228 252 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pvu2g1080 300 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 4 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1080 Pvu-Chr2 21073548 21077072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1080 43 251 Peroxidase AT5G51890 28.879 4.10e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1080 K00434 - gmx:100813526 313.923