Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1075 ATGGCGGACACTGCCGGCGACGACAAAGGCGTTACCTATCTTCACGGCGACCTCGATTTGAAAATCATCGAGGCGCGTCACTTGCCGAACATGGACATCTTCTCGGAGCGTCTTCGCCGCTGTGTAACCGCCTGCGACACTATCAAATTCCACTCCGACGACCCGGCCGACGGTGGAAGCCAGCGGTCGCGGCAGCACCACCACCGGAGGATCATCACGAGCGACCCGTATGTGGCGGTTTCGGTGCCGCAGGCCACCGTGGCGCGCACGCGCGTGCTGAAGAACTCGTCGAACCCTGTGTGGAACGAGCGGTTCCACATCCCGCTCGCGCATCCGGTCGTGGATTTGGAGTTCCGTGTGAAGGACGACGACGTTTTCGGCGCGCAGACCATTGGAACCGTGAAGATTCCGGCGCAGCAGATTGCCACCGGCCAGTTGATTTCCGGCTGGTTCTCTGTAGTCGGACCGTCTGGGAAGCCGGTGAAGGCGAACACGGCGCTGCACGTGGATATGAAATTCACGCCGGTGGAGAAGAATTTGCTTTACCAGCGAGGCATTGCGGCGGATCCGGAGCATCGCGGAGTGAGGAACACGTATTTTCCAGTGAGAAAGGGGAGTTCGGTGAGGTTGTATCAGGATGCGCATTGTCCAGATTCTGGCGGAGGGAAGTTACCGGAGGTGAAGCTTGATAATGGAGAGGTTTATAGGCACGGGAAGTGTTGGGAGGATATTTGTTATGCCATATCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCGATTTACCATAAGATAAAGCTTGTTAGAGAGCCTACAAGGCCATTGCCACGAGGTGGCGATTTGACGCTTGGCGAATTGCTGAAGTATAAGTCTGAAGAAGGGGTGAGAGTGCTGTTGCTGGTTTGGGATGATAAAACTTCGCACGATAAGGTTTTCCTCAAGACGACTGGTGTGATGCAGACTCATGATGAAGAAACCAGGAAGTTTTTTAAACATTCTTCAGTAATGTGTGTTCTGTCGCCTCGGTATGCCAGCAGCAAGATGAGCTTCTTGAAGCAACAGGTTGTTGGAACGGTCTTCACACACCACCAAAAATGTGTGATCGTGGACACCCAGGCTATGGGGAATAATAGGAAGATAACTGCTTTTATTGGAGGTCTTGATCTATGTGACGGTCGCTATGACACACCCGAGCATCGTCTGTTTCGTAATCTTGACACTGTATTTTCTGGTGATTTCCACAATCCTACATTTCCTGCTGCATTAAGGGCTCCTAGACAACCGTGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGATGTTCTTATTAATTTTGAGCAGCGATGGAAAAAGGCAACTAAGTGGAGAGAGTTTGCAATCCTTTTCAAAAAATCCTCTCAATGGCATGATGATGCTTTGATAAGAATAGAACGCATCTCATGGATATTAAGTCCTTCTGTTTCCACAAAGGAAAATTATACAGTTGTTCCAGAGGATGACCCTTTAGTATGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGGTCCCTCAAAGGATTTCCCAAACATGTTGATGTTGCTCTGGCCCAGAATCTTATTTGTGCTAAAGATTTGGTCATAGACAAAAGCATTCAAACAGCGTACATTGAAGCAATCAGATCTGCTCAACACTTTATTTATATTGAAAACCAATACTTCATTGGATCATCGTATGCATGGCCTTCCTATAAAGATGCAGGGGCTGATAATCTCATTCCAATGGAGTTGGCACTGAAAATTACTAGTAAAATCAGAGCTAAGGAAAGGTTTGCTGTCTATGTTGTTTTACCAATGTGGCCGGAAGGTGATCCAAAAACTGGGGCTATGCAAGAAATCCTCTTTTGGCAGGGCCAAACGATGCAAGCAATGTATGACACAATTGCTAGAGAATTGAAAGCAATGCAAATTTCTGACGTGTACCCACAAGATTACCTCAATTTTTATTGCCTTGGAAATCGGGAAGACTTGAATGAAGAAAATTCAAGCACAAATGGTGCACAGGTCTCGGGAGCATATAAACACCGCAGATTTATGATTTATGTGCATGCTAAGGGAATGATAGTTGATGATGAGTATGTAATAATTGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCAATGGGTGCATATCAACCCCATTACACATGGTCAGCTAAGCAAAGACATCCACGTGGTCAGATTTATGGTTATCGAATGTCACTTTGGGGAGAGCATCTTGACATGTTAGATGAAACTTTTGAGGAGCCGGAGAGTTTGGAGTGTGTGCGTAAAGTGAATGCAATTGCTGAAGATAATTGGAAATTATTCACTTCTGAAGATTTCTCACTTCTGCAAGGACATCTTCTTAAGTATCCTATACTGGTAGATTCTGATGGAAAGATTAAATCCCTATCCGACTGTGAGAATTTTCCCGATGCAGGCGGTAAGATATTGGGTGCTCACTCCACAGCAATCCCAGATATTCTAACAACTTAA 2580 0.4628 MADTAGDDKGVTYLHGDLDLKIIEARHLPNMDIFSERLRRCVTACDTIKFHSDDPADGGSQRSRQHHHRRIITSDPYVAVSVPQATVARTRVLKNSSNPVWNERFHIPLAHPVVDLEFRVKDDDVFGAQTIGTVKIPAQQIATGQLISGWFSVVGPSGKPVKANTALHVDMKFTPVEKNLLYQRGIAADPEHRGVRNTYFPVRKGSSVRLYQDAHCPDSGGGKLPEVKLDNGEVYRHGKCWEDICYAISEAHHMVYLVGWSIYHKIKLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKVFLKTTGVMQTHDEETRKFFKHSSVMCVLSPRYASSKMSFLKQQVVGTVFTHHQKCVIVDTQAMGNNRKITAFIGGLDLCDGRYDTPEHRLFRNLDTVFSGDFHNPTFPAALRAPRQPWHDLHCRIDGPAAYDVLINFEQRWKKATKWREFAILFKKSSQWHDDALIRIERISWILSPSVSTKENYTVVPEDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKHVDVALAQNLICAKDLVIDKSIQTAYIEAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKITSKIRAKERFAVYVVLPMWPEGDPKTGAMQEILFWQGQTMQAMYDTIARELKAMQISDVYPQDYLNFYCLGNREDLNEENSSTNGAQVSGAYKHRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIAMGAYQPHYTWSAKQRHPRGQIYGYRMSLWGEHLDMLDETFEEPESLECVRKVNAIAEDNWKLFTSEDFSLLQGHLLKYPILVDSDGKIKSLSDCENFPDAGGKILGAHSTAIPDILTT* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1075 859 Pfam Phospholipase D Active site motif 359 394 IPR001736 GO:0003824
Pvu2g1075 859 Pfam Phospholipase D Active site motif 705 731 IPR001736 GO:0003824
Pvu2g1075 859 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 176 IPR035892 -
Pvu2g1075 859 Pfam Phospholipase D C terminal 778 848 IPR024632 -
Pvu2g1075 859 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 359 394 IPR001736 GO:0003824
Pvu2g1075 859 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Pvu2g1075 859 CDD C2_plant_PLD 10 174 - -
Pvu2g1075 859 PIRSF PLD_plant 4 859 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pvu2g1075 859 PANTHER PHOSPHOLIPASE D 10 859 IPR015679 -
Pvu2g1075 859 PANTHER PHOSPHOLIPASE D DELTA 10 859 - -
Pvu2g1075 859 Pfam C2 domain 16 152 IPR000008 -
Pvu2g1075 859 SMART pld_4 704 731 IPR001736 GO:0003824
Pvu2g1075 859 SMART pld_4 359 394 IPR001736 GO:0003824
Pvu2g1075 859 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 704 731 IPR001736 GO:0003824
Pvu2g1075 859 Gene3D Endonuclease Chain A 523 755 - -
Pvu2g1075 859 SUPERFAMILY Phospholipase D/nuclease 197 468 - -
Pvu2g1075 859 Gene3D C2 domain 14 183 IPR035892 -
Pvu2g1075 859 SMART C2_3c 17 150 IPR000008 -
Pvu2g1075 859 Gene3D Endonuclease Chain A 229 478 - -
Pvu2g1075 859 SUPERFAMILY Phospholipase D/nuclease 555 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1075 Pvu-Chr2 21023739 21031626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1075 1 695 Phospholipase D Gene Family (Wang group) AT4G35790 72.325 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1075 K01115 - gmx:100814486 1582.39