Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g1074 | ATGAATCGAAGGTCAATTCGTTGCTCTGTGATTCGACAAAACAAAACCCTTACCCTTCGTTGTCTCATTCGTGACTCTTCTTCATCTCCGATCAAGAGCTCTATACTCGGAGATCTTGTTGAAATGGCCGATTCTCCACCAAGAAGGAATTCACGGTCCCCTTCCCCATGGAGGGCTCAGTCAAGATCGAGGTCAAGGTCTAGATCTAGGCCTAGGTCCCGATCTAGATCATTTGAAAAACAAAGGCCACGATCCCGCTCAAGAAGTCGTGGAAGATCAAGATCAAGAAGTAATGAAAGGACGGAGGCTAAAAATTCAGGGACTACACTTTACGTCACTGGACTATCTTCAAGGGTCACTGAGAGAGACCTGGAGGAGCATTTCTCTAAGGAGGGAAAGGTTTCTTCTTGTTTTCTTGTGGTGGAGCCTCGTACTCGCATTTCACGAGGTTTTGCTTTTATTACAATGGATAATGTTGAGGATGCAAACCGCTGCATCAAATATCTCAATCAATCAGTTTTAGAGGGTCGCTATATCACTGTTGAGCGGTCACGAAGGAAGCGTGCAAGAACTCCTACACCTGGACACTATCTTGGCCTGAAAAGTACTAGAGACTATGGATTTCGCGGTGACCGTGGAAGGTATAGAGGTGGTGGATCTGGTCGTGATGATCATGCATATCGTGGAGAGCGTGGAAGATCTCCAAGGCGCTCACCTTATCGAGGTGGTGGTAGAGATTATTCACCAAGGCATTCACCGCCACCCTATGCTGGAAGAACTAGGAGGGATAGGTCCAGGTCACTTCCATACTCTCCGTATGGTAGTCCAGACAGGAGGTTTGCTCGTGGATCTAGGTGA | 858 | 0.4732 | MNRRSIRCSVIRQNKTLTLRCLIRDSSSSPIKSSILGDLVEMADSPPRRNSRSPSPWRAQSRSRSRSRSRPRSRSRSFEKQRPRSRSRSRGRSRSRSNERTEAKNSGTTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFITMDNVEDANRCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSTRDYGFRGDRGRYRGGGSGRDDHAYRGERGRSPRRSPYRGGGRDYSPRHSPPPYAGRTRRDRSRSLPYSPYGSPDRRFARGSR* | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g1074 | 285 | PANTHER | RNA RECOGNITION MOTIF | 43 | 281 | - | - | |
Pvu2g1074 | 285 | SUPERFAMILY | RNA-binding domain, RBD | 103 | 218 | IPR035979 | GO:0003676 | |
Pvu2g1074 | 285 | MobiDBLite | consensus disorder prediction | 37 | 114 | - | - | |
Pvu2g1074 | 285 | SMART | rrm1_1 | 109 | 182 | IPR000504 | GO:0003723 | |
Pvu2g1074 | 285 | PANTHER | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 43 | 281 | - | - | |
Pvu2g1074 | 285 | CDD | RRM_RBMX_like | 107 | 186 | - | - | |
Pvu2g1074 | 285 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 110 | 179 | IPR000504 | GO:0003723 | |
Pvu2g1074 | 285 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 108 | 186 | IPR000504 | GO:0003723 | |
Pvu2g1074 | 285 | MobiDBLite | consensus disorder prediction | 205 | 244 | - | - | |
Pvu2g1074 | 285 | Gene3D | - | 44 | 192 | IPR012677 | - | |
Pvu2g1074 | 285 | MobiDBLite | consensus disorder prediction | 184 | 285 | - | - | |
Pvu2g1074 | 285 | MobiDBLite | consensus disorder prediction | 48 | 62 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g1074 | Pvu-Chr2 | 21000211 | 21003055 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g1074 | 81 | 190 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 29.091 | 6.88e-09 | 54.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g1074 | K12897 | - | gmx:100527350 | 340.502 |