Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1056 ATGGCACTTTTTCTGTATCTTGTGCTTTTCCTAGCCCTGACTCGTCATTCAAGTGCTCTTTACTGTTTATGCAAAGATGGTGTTGGTGATCAAGCCCTTCAGAAAGCCATAGATTATGCTTGTGGAGCTGGGGCAGACTGTACCCCTATTCTCCAAAATGGAGCTTGTTACAACCCCAACACTGTGAAGGATCACTGTAATTATGCAGTTAATAGCTATTACCAGAGAAAGGGAAATGCTCAAGGAACATGTGATTTTGCAGGTACTGCCGCAACCAGTTCAAATCCACCTGCTGCTTCATCTGGATGTGTCTACCCCTCAAGTCCTAGCAATGCAGGAACAACACCATCAACTGGATCACCACCTGGTACAACCCCATCAGCAGGTACACCTCCAGGCACAAGCTTAACTCCTGGTTCTCCTAACACATTTGGAATAAGTCCAACATCTACAACTGGCTCTAGTGGCAATGGGGCTATTTTGGGAGCCACCAACTCTGAGTTGCTATTGCTCTTTGTGCTAACCATGTGGTTAGCAATCAGGGTGTAG 549 0.4608 MALFLYLVLFLALTRHSSALYCLCKDGVGDQALQKAIDYACGAGADCTPILQNGACYNPNTVKDHCNYAVNSYYQRKGNAQGTCDFAGTAATSSNPPAASSGCVYPSSPSNAGTTPSTGSPPGTTPSAGTPPGTSLTPGSPNTFGISPTSTTGSSGNGAILGATNSELLLLFVLTMWLAIRV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1056 182 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 172 - -
Pvu2g1056 182 SMART X8_cls 20 105 IPR012946 -
Pvu2g1056 182 MobiDBLite consensus disorder prediction 102 155 - -
Pvu2g1056 182 Gene3D - 15 112 - -
Pvu2g1056 182 PANTHER BETA-1,3 GLUCANASE 1 172 IPR044788 -
Pvu2g1056 182 Pfam X8 domain 21 90 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1056 Pvu-Chr2 20458510 20460638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1056 21 107 Glycoside Hydrolase AT2G05790 44.318 1.04e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1056 - - gmx:100811705 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1056 2 20458510 20460638 Pvu2g1056 2 20458510 20460638 ECH
Pvu2g1056 2 20458510 20460638 Pvu3g0442 3 4793023 4795242 PCT