Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1044 ATGGAAGAAGTTTGTCTGAATAGTGAGCCATTTTTTGATGAAAGCGATGATGCTGATGTTGAAGGTTCTTCTGTAGCAGAACACGGACTTGAATCTTTAAACTCACAACCGAAAAACCCTCCAGTTCCAACAGTAGGTCTGGAGTTTGATTCCTTTGAGGAAGTTTACAACTTCTACAATATCCATGCAAAGGAACAAGGCTTTGGAATCAGAGTTAGCAATTCTTGGTTTAGATCAAAGAAAAAAGAGCGCTATAGGGCAAAACTTAGCTGCAGTAGTGCTGGTTTTAAGAAAAAAAGTGAAGCGAATAATCCAAGACCAGAAACAAGAACTGGTTGTCCTGCAATGATAGTGATTAGAATGGTTGAGTCCAGGAGATGGAGAATAGTGGAAGTTGTGCTTCAACACAACCATCAAGTGAGTCCTCAGAGCAAACAATTTTACAAGTCACACAAGAAAATGATCCTTGAAGCCAGCAAATCACAACCACCTCCAGAGCCAGTAACAGAAGTACACACCATCAAGTTGTATCGAACAACTGTCATGGATGTTGATTACAATGGTTACTCAAATTCTGACGAAAGTCGTGACACCAATTTTGATAAATTTAAATGTTTGGAACTTAGAGAAGGGGATGCCAGTGCTATATACAATTATTTTTGCCGAATGAAGTTGACCGATCCAAATTTCTTTTACTTGTTTGATATTGATGATGATGGGCACCTAAAAAATGTTTTCTGGGCTGATTCCAGGTCAAGGATAGCTCATAATTACTTTAATGACACAGTTACAATAGACACAACTTGTTTGGCAAACAAATATGAGATCCCTTTGATATCATTTGTTGGTGTAAACCATCATGGACATTCTATATTATTGGGTTGTGGCTTCCTTGGACACGAATCAGTGGATTATTTTGTATGGATATTCAAGGCATGGCTTAAGTGTATGCTTGGTCGTCCTCCACATGTTGTTATTACTGACCAGTGCAAGACATTGCAAATCGCAGTTGCTCAGGTTTTCCCTCATGCTCGTCATTGTTATTCTTTGCAGTATATCATGCAAAGAGTTCCAGAAAAGTTGGGAGGGTTGCAAGGATATGAAGCAATCAGAAGACAGATGTATAATGCTGTCTACCACTCATTAAAGATAGTTGAGTTCGAATCTTCTTGGACTGATATGATTAAATGTCATGGACTGGGAGATAACAAGTGGATTCAGACACTGTATAAGGATAGGCATCTATGGGTCCCTGTTTACCTAAAAGATGTTTTTTTTGTAGGACTCATCTCAACTAAAGAAAATGAGGGTCTGACTGCATTTTTTGATGGTTATGTGCATAAACACACATCCTTTAAGGAATTCCTTGATAAGTATGACTTAGCTCTGCACAGGAAGCACTTGAAAGAAGCCATGGCAGATTTGGAGACTAGAAAAGAAAGCTTTGAATTCAAAACGAGATGTAATTTTGAGGCCCAACTCTCAAAGGTGTACACAGAAGAAATCTTTAAAAAGTTTCAAACAGAGGTTGAGGGCATGTATTCTTGCTTCAACACAAGACAGGTTAATGTCAATGGATCTATAATAACATACATTGTGAAAGAAAGAGTTGAAGTTGAGGGGAATGAGAAGGGAGTTAAAAGTTTTGAAGTTTTATATGAGACTACAAAATTGGATATTCGATGCATTTGCAGTTTGCTCAATTACAAAGGATATTTGTGCAGGCATGCGTTGAATGTTCTCAATTATAATGGCGTTGAGGAAATCCCATCTCGGTACATTCTGCGCCGTTGGACTAGGGATTTCAAGCAAACCTTTAATCAACTCCATGCTTCTAGTAATATTAATACCTACCACCCTGTCCACTTGTATACCCATTTGTTTAACAGTGCTCTTCCAGTGTTAGAAGTAGGGGCACAGTCACAGGAGCATTATATGGTTGCTGTAAAAGAATTGCAGGAGTTGCTAGATAAGTTTGATATAGAGGACAATAACTCGATGTAA 2004 0.3832 MEEVCLNSEPFFDESDDADVEGSSVAEHGLESLNSQPKNPPVPTVGLEFDSFEEVYNFYNIHAKEQGFGIRVSNSWFRSKKKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIVIRMVESRRWRIVEVVLQHNHQVSPQSKQFYKSHKKMILEASKSQPPPEPVTEVHTIKLYRTTVMDVDYNGYSNSDESRDTNFDKFKCLELREGDASAIYNYFCRMKLTDPNFFYLFDIDDDGHLKNVFWADSRSRIAHNYFNDTVTIDTTCLANKYEIPLISFVGVNHHGHSILLGCGFLGHESVDYFVWIFKAWLKCMLGRPPHVVITDQCKTLQIAVAQVFPHARHCYSLQYIMQRVPEKLGGLQGYEAIRRQMYNAVYHSLKIVEFESSWTDMIKCHGLGDNKWIQTLYKDRHLWVPVYLKDVFFVGLISTKENEGLTAFFDGYVHKHTSFKEFLDKYDLALHRKHLKEAMADLETRKESFEFKTRCNFEAQLSKVYTEEIFKKFQTEVEGMYSCFNTRQVNVNGSIITYIVKERVEVEGNEKGVKSFEVLYETTKLDIRCICSLLNYKGYLCRHALNVLNYNGVEEIPSRYILRRWTRDFKQTFNQLHASSNINTYHPVHLYTHLFNSALPVLEVGAQSQEHYMVAVKELQELLDKFDIEDNNSM* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1044 667 Pfam FAR1 DNA-binding domain 57 141 IPR004330 -
Pvu2g1044 667 MobiDBLite consensus disorder prediction 1 25 - -
Pvu2g1044 667 MobiDBLite consensus disorder prediction 1 20 - -
Pvu2g1044 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1 23 664 - -
Pvu2g1044 667 Pfam MULE transposase domain 263 355 IPR018289 -
Pvu2g1044 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 664 IPR031052 GO:0006355
Pvu2g1044 667 Coils Coil 667 667 - -
Pvu2g1044 667 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Pvu2g1044 667 Coils Coil 465 485 - -
Pvu2g1044 667 SMART 26again6 560 587 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1044 Pvu-Chr2 20134182 20139180 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu2g1044 MULE 1.2e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1044 K17604 - gmx:100811666 1251.88