Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1043 ATGAAGCTGCGGCTGCGAATCCTCCTCATTGCTCTGGTGTTGTGCGCCCCATTTTCCTCCTCTTTGAAGCCCAAGGACCGGTTCCTTGGAATCGCTCCCGAAGATGACAAGTATTACAGGGCTTCCGATGTTATAAGATGTAAAGATGGATCCGGAAAATTCAACCAGGCGCAGCTCAATGACGATTTTTGCGATTGCGCTGATGGCACCGATGAACCGGGTACATCGGCATGTCCGGGTGGAAGATTCTTTTGTCGGAATGCAGGCCATTCTCCTGTTTACTTGTTTTCATCCAGAGTGAATGATGGAATTTGCGATTGCTGTGATGGAACTGACGAATATGATGGTCAAGCAATGTGTCCAAATACCTGCTGGGAGGCTGGGAAAGTGGCTCGAGATAGACTGGAAAAAAAGATTGCAACTTATAAAGAGGGTGTCAAATTGCGAAAGCAAGAAATTGAACAAGCTAAAGTGGCTATCGAGAAGGATGAGGCAGAACTTTCAAAATTAAAAAAGGAAGAAAGTGTACTTAAAGTGCTTGTAAAACAGCTAAAGGATCATAAAGAACAAATAGAGAAGGCAGAGGAGAAGGAACGTTTACAGAAAGAAAAGGAAGAGATGCAGAAAAAGGAGTTTAAGGAGAAGGCTAATGAAGCAAAAGATAAAACTGATGAAGATATGGGGAATAGAAATGAAGCTGGAAAGCATTCGGATGTAGAAGATAATGATGTGGAAAATAATCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCAGATCAGGATGAAGCAGGGGAGAAATTAGCAGATGTACTTGATAATGATGATGGAGAAAGCGATAGTCCTGGAAGTGAAGGATCTTTGCATAATAAAGTGGAAGAGGCGACTAATGCAAAAGAAGCCAATGAAGAACCTATTATTAAATCTGAGACCAATGTTAAGGTTGAAAAGGAAGAGTCTTCAGATGAAAACGGCAATAAGGGGAATGGCGTAACTGAAAATACTGAGGGATTATCAAGGGAAGAGTTGGGCCGGCTTGTTGCTTCACGTTGGACAGGAGAAAAGACTGATGTGGAGAGTGCTGAAACTGATACTAACTTAGACAATGAAGATCACGAAGATCTTCCGAAGGAGACAAAAAAGGAGGAATATGAAGGGTATGCTTCTGAAACTGATGATGAAAGCAACAGATATGATGATGATACCCACAAATATGACGATGAAGATGATGTCGACGAGGAATATCAAGAGGATGAGCATGATGACCTTAGTTCCTCCTACAAATCTGATTCTGATAATGAACCAGACTTGTCAGATAATCCTTCTTGGTTAGAGAAAGTACAGAAAACTGTACGAAATATTCTTCAGGTTGTCAACTTATTCCAGGCTCCGGTGAATCAGTCAGATGCTGCTCGTGTACGCAAGGAATATGATGAATCAAGTGCCAAGTTGTCTAAAATACAGTCTAGAATATCAAGTCTGACGCAAAAGCTAAAACATGATTTTGGCCCAGCGAAGGAGTTTTATACATTCTATGATCATTGCTTTGAGGGCAAGGAGAACAAGTACACTTATAAAGTCTGCCCCTATAAACAGGCTTCTCAAGAGGAGGGCTATTCCACCACCCGTTTGGGGCGCTGGGACAAATTTGAGGATTCATACAAAATAATGTTCTTTTCTAACGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTAAAGGTGAAGCTAAGATGTGGGTTGAAAAATGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAATATGTAGCTTTATTATCTACCCCAGCCCTTTGTCAGGAGGAAAGGCTAAAGGAGTTACAGCACAGACTAGACCTATTGAATGTGGAACTACCAGCAAACCATGATGAGTTGTGA 1899 0.415 MKLRLRILLIALVLCAPFSSSLKPKDRFLGIAPEDDKYYRASDVIRCKDGSGKFNQAQLNDDFCDCADGTDEPGTSACPGGRFFCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDGQAMCPNTCWEAGKVARDRLEKKIATYKEGVKLRKQEIEQAKVAIEKDEAELSKLKKEESVLKVLVKQLKDHKEQIEKAEEKERLQKEKEEMQKKEFKEKANEAKDKTDEDMGNRNEAGKHSDVEDNDVENNHDKIENLEGSPADQDEAGEKLADVLDNDDGESDSPGSEGSLHNKVEEATNAKEANEEPIIKSETNVKVEKEESSDENGNKGNGVTENTEGLSREELGRLVASRWTGEKTDVESAETDTNLDNEDHEDLPKETKKEEYEGYASETDDESNRYDDDTHKYDDEDDVDEEYQEDEHDDLSSSYKSDSDNEPDLSDNPSWLEKVQKTVRNILQVVNLFQAPVNQSDAARVRKEYDESSAKLSKIQSRISSLTQKLKHDFGPAKEFYTFYDHCFEGKENKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYKIMFFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVALLSTPALCQEERLKELQHRLDLLNVELPANHDEL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1043 632 Coils Coil 604 624 - -
Pvu2g1043 632 MobiDBLite consensus disorder prediction 195 274 - -
Pvu2g1043 632 MobiDBLite consensus disorder prediction 195 441 - -
Pvu2g1043 632 Gene3D - 508 606 IPR009011 -
Pvu2g1043 632 Pfam Glucosidase II beta subunit-like 25 172 IPR028146 -
Pvu2g1043 632 MobiDBLite consensus disorder prediction 370 404 - -
Pvu2g1043 632 PANTHER BNACNNG14010D PROTEIN 1 632 - -
Pvu2g1043 632 SUPERFAMILY Mannose 6-phosphate receptor domain 513 606 IPR009011 -
Pvu2g1043 632 Coils Coil 146 222 - -
Pvu2g1043 632 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 1 632 IPR039794 -
Pvu2g1043 632 MobiDBLite consensus disorder prediction 292 324 - -
Pvu2g1043 632 Pfam Glucosidase II beta subunit-like protein 474 617 IPR036607 -
Pvu2g1043 632 Coils Coil 470 490 - -
Pvu2g1043 632 MobiDBLite consensus disorder prediction 421 435 - -
Pvu2g1043 632 MobiDBLite consensus disorder prediction 405 420 - -
Pvu2g1043 632 ProSiteProfiles MRH domain profile. 513 608 IPR044865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1043 Pvu-Chr2 20109153 20119851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1043 19 632 Calmodulin-binding Proteins AT5G56360 58.347 0.0 635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1043 2 20109153 20119851 Pvu2g1043 2 20109153 20119851 ECH