Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1040 ATGCAGAAGATTTTGACGTCACTTGAGGCAGAGGCTTCAACTGGGTTCAAGAGTCATAGTAGCTGCTCCACAATGTCTTCTCGCAGATCAAATGGAAGAGTAGCTAGTGGCAGAGTTGCATTGGAAAAGGAAGTCCCCTTACCACAGCTGCCAGATCATACAACAAATTTGCAATGGGATGAGGTTAAACCACTTTCAGGAAAACCATACAGTCATAATATTCTTTCACCTACAAATCTCTGTCCCCGTTATTATATGTGGCTTGCGTCCAACTTACGGTTAGAACTTCCTTCTTGTGAGGTCCCCACCATACTCACCTATATGGGCAAGAGCTGGGACATGGTGTATTGTGGACAAAACAAACAGCAGGTTTTTAATGTCGCAGGATGGAAAAAGTTTGCTGTTGAAAATTGTTTGAGGATTGGAGATGCATGCATTTTTGATCTCATGGAAAGCAGTGACAAGAAAATAATCTTTGAAGTTCAGATTCTTAGAGGTGACATTCCATCCGAAATTCTTGAAAATGAAATGATCACGGGTCAGAGTCGGGAAATGCCAATTGTCCTTAACTAG 573 0.4188 MQKILTSLEAEASTGFKSHSSCSTMSSRRSNGRVASGRVALEKEVPLPQLPDHTTNLQWDEVKPLSGKPYSHNILSPTNLCPRYYMWLASNLRLELPSCEVPTILTYMGKSWDMVYCGQNKQQVFNVAGWKKFAVENCLRIGDACIFDLMESSDKKIIFEVQILRGDIPSEILENEMITGQSREMPIVLN* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1040 190 CDD B3_DNA 74 165 IPR003340 GO:0003677
Pvu2g1040 190 Gene3D - 58 167 IPR015300 -
Pvu2g1040 190 ProSiteProfiles B3 DNA-binding domain profile. 109 167 IPR003340 GO:0003677
Pvu2g1040 190 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 24 175 IPR044837 -
Pvu2g1040 190 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 24 175 - -
Pvu2g1040 190 SUPERFAMILY DNA-binding pseudobarrel domain 100 165 IPR015300 -
Pvu2g1040 190 Pfam B3 DNA binding domain 103 160 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1040 104 161 REM Transcription Factor Family AT4G31680 36.207 7.48e-06 43.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pvu2g1040 B3 5.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1040 - - gmx:100804948 244.973