Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1025 ATTCCTTACTTCCAAGAAGTAATTGTTATGGCATCCACATGTGATGCTTGTGGCTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAAGGAAAAATAATTACTCTTTCTGTGAAAAATGTCAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAAGTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACAACTGTTGAAGGTTTAATTACAAGAATTAGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTCTTGATGAAAATAGTAGAAGCAAGTGGATAGACTTTAAAGCAAGGCTAAACAAGCTTCTTAGCTTGGAAGAACCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTGAAAGAGGACAATCAATTAGCTTTTGAGGACTACGAGAGGTCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATGGACACCTCTTCTGCCGAAGTTGGTGATGCACCAACCAATACTTCTAAAACTGAGTGA 579 0.4007 IPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKIITLSVKNVNDLSRDVIKSDTASVKVPEVDLELASGTLGGIVTTVEGLITRISESLERVHGFTFGDSLDENSRSKWIDFKARLNKLLSLEEPWTLILDDALANSFVAPATDDLKEDNQLAFEDYERSWEQNEELGLNDMDTSSAEVGDAPTNTSKTE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1025 192 Gene3D ZPR1, A/B domain 29 171 IPR042451 -
Pvu2g1025 192 SMART zpr1 1 143 IPR004457 GO:0008270
Pvu2g1025 192 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 1 181 - -
Pvu2g1025 192 MobiDBLite consensus disorder prediction 166 192 - -
Pvu2g1025 192 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 1 175 IPR004457 GO:0008270
Pvu2g1025 192 MobiDBLite consensus disorder prediction 169 192 - -
Pvu2g1025 192 Pfam ZPR1 zinc-finger domain 1 141 IPR004457 GO:0008270
Pvu2g1025 192 Gene3D ZPR1, zinc finger domain 1 28 IPR042452 -
Pvu2g1025 192 PANTHER ZINC FINGER PROTEIN ZPR1 1 181 IPR040141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1025 Pvu-Chr2 19430418 19433331 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1025 1 190 C2H2 Transcription Factor Family AT5G22480 75.789 1.39e-104 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1025 K06874 - pvu:PHAVU_002G0993000 382.104