Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1023 ATGCTAAATCGTCAAGTGGTTAAATCAGAATCTGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAACGTGGTAGTTTGTCAACGGTGGAAGGGATACTTATGAGAGCAACCGATGAACTTCAAGCCCTTCAAGAGGAACGCAAAAAAGTGGCTCCGGAGACAGCTGAAGCAATCGATCAGTTCTTGGTGAAACTGCGAGCCTGTGCAACAGGAGAATCATGCATCACATTTATTCTTGATGATCCTGTCGGAAACAGCTTTATTGAAAATCCGCTAAGGTATCCTCACTTACAAGTAAATGACCAAAGGTATTCAGTGATAGCATATGAATTAGCAACCTCCTGGATTTGTTGCTCAAGAGTGGAGTGTGGTTTAGTAT 397 0.4257 MLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRATDELQALQEERKKVAPETAEAIDQFLVKLRACATGESCITFILDDPVGNSFIENPLRYPHLQVNDQRYSVIAYELATSWICCSRVECGLV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1023 132 Gene3D ZPR1, A/B domain 1 119 IPR042451 -
Pvu2g1023 132 Coils Coil 32 52 - -
Pvu2g1023 132 PANTHER ZINC FINGER PROTEIN ZPR1 1 99 IPR040141 -
Pvu2g1023 132 Pfam ZPR1 zinc-finger domain 2 95 IPR004457 GO:0008270
Pvu2g1023 132 SMART zpr1 2 96 IPR004457 GO:0008270
Pvu2g1023 132 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1023 Pvu-Chr2 19422206 19429049 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1023 2 94 C2H2 Transcription Factor Family AT5G22480 32.632 3.39e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1023 K06874 - pvu:PHAVU_002G0993002 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1023 2 19422206 19429049 Pvu2g1023 2 19422206 19429049 ECH