Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1000 ATGGAGCCCTGCTTCTTCATCATACTCTCTCTCTCCGTTTGCGTCCTAATAAGACGCTTCTTCTCCCTTCACAACAAACCCACCACTCCTCTTGGCCCTTCACACATCCCAATCATCTCAAACATCCTTTGGCTAACAAAGTCCTTTCAAATCGAACCAATTCTCCCAACCCTCCACACCAAATACGGTCCCATTCTCACTCTCTACATTGCTACTACTCCCGTCGTCTTCATACGCGACCGCTTTCTCGCCCACCAAGCCCTCGTCCAAAATGCTTCTCTTTTCTCCGATCGCCCCAAAGCTCTCGCCGCCGCCAAAATCATAACCACCCACCAACACAACATTAGCTCCGCCTCCTATGGCGCCACCTGGCGCATTCTCCGCCGCAACCTAACCTCTCATATGCTCCACCACTCCCGCGTCAAGTCCTTCTCTGGGATCCGCAACTGGGTCCTCCACACCCTCCTCAAGCACCTCAAATCCCATTCCGAAACCAACAATTCTGTCAGAATCATCGACCATTTCCGATACTCCATGTTCTGCTTGCTCGTCTTCATGTGTTTCGGGGAACAACTCGATGATGGCAAAGTCCGAGACATCGAGCGCGTGCAGCGCCAGATGCTTCTGCGCGTTAAATCCTTCAACATCCTCAATTTCTGGCCCAGAGTCACGCGCGTTTTGTTCCGCAAACTCTGGGAGGAGTTGCTGAGGCTTCGGACGGAGCAAGAGGATGTTTTGGTTCCGCTTATAAGAGCCAGGAAGCAAAAGCAAAAGCAAGGCAAGGAGGAAGGTGTTGCTTCTTATATTGATACTTTGTTGGATTTGCAGTTGCCTGAGGAGAAACGCAAGCTCAACGAAGAGGAACTTGTGACGCTGTGTAATGAATTTTTAAACGCGGGCACGGACACGACTTCCACGGCGTTGCAGTGGATCATGGCGAATTTGGTGAAGTACCCGCATGTGCAAGAGAGGTTGGTGGATGAGATAAGGGAGGTATTGGGTGAGAGAGAAGAGAGAGAAGTGAAAGAAGAAGACTTGCAGAAACTTGGTTATCTGAAGTGTGTGATTTTGGAGGGTTTGAGGCGTCACCCACCTGGTCACTTTGTGTTGCCTCATGCAGTAACTGAGGATGTGGTTTTTAATGATTACTTGGTCCCTAAGAATGGGACAGTGAATTTCATGGTGGCAGAGATGGGGTGGGACCCTAAGGTATGGGAGGATCCCTTGGCGTTTAAGCCAGAGAGGTTTATGAATGATGAGAGCTTTGATATTACTGGGAGTAAAGAGATCAAGATGATGCCCTTTGGTGCTGGGAGAAGGATTTGCCCTGGCTATAATCTCGCCCTTCTTCATTTGGAGTACTTCGTCGCTAATTTAGTTTGGAATTTTGAGTGGAAGGTTCCTGATGGAGGAGATGTGGATTTGTCAGAGAAACAAGAGTTCACTGTGGTCATGAAAAATGCATTGCATGTTCATCTTTCTCCTAGAATCTAG 1494 0.488 MEPCFFIILSLSVCVLIRRFFSLHNKPTTPLGPSHIPIISNILWLTKSFQIEPILPTLHTKYGPILTLYIATTPVVFIRDRFLAHQALVQNASLFSDRPKALAAAKIITTHQHNISSASYGATWRILRRNLTSHMLHHSRVKSFSGIRNWVLHTLLKHLKSHSETNNSVRIIDHFRYSMFCLLVFMCFGEQLDDGKVRDIERVQRQMLLRVKSFNILNFWPRVTRVLFRKLWEELLRLRTEQEDVLVPLIRARKQKQKQGKEEGVASYIDTLLDLQLPEEKRKLNEEELVTLCNEFLNAGTDTTSTALQWIMANLVKYPHVQERLVDEIREVLGEREEREVKEEDLQKLGYLKCVILEGLRRHPPGHFVLPHAVTEDVVFNDYLVPKNGTVNFMVAEMGWDPKVWEDPLAFKPERFMNDESFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFEWKVPDGGDVDLSEKQEFTVVMKNALHVHLSPRI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1000 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Pvu2g1000 497 SUPERFAMILY Cytochrome P450 32 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 495 - -
Pvu2g1000 497 PANTHER CYTOCHROME P450 4 495 - -
Pvu2g1000 497 Pfam Cytochrome P450 30 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g1000 497 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1000 Pvu-Chr2 18664675 18666441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1000 1 496 Cytochrome P450 AT1G64940 55.078 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1000 K24184 - gmx:100805244 770