Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0993 ATGACATTGATTTCAATGGAGAACATTCTGGGTCTTATCAAACTTCGTATTAAAAGAGCCTCTAATCTCAAAGCTTGCGATACTCGTACCAGTGATCCTTATGTCTTTGTCACCATGGCAGAACAGCAACTGAAAACTACAGTTGTGAAAGATACCTGTAATCCTGAGTGGAATGAAGAACTGACACTTTATGTAACAAATGTTAACATTCCTATACTTCTGACAGTTACAGACAAAGACACTTTCACGGTAGATGACAACATGGGCGATGCAGAAATAGACTTAAAGCCATATCTTCAGTGTGTGAAGATGGAGTTGAGCGATCTCCCAGAGGGTCATATAGTCAAGAAGGTTCAACAAGATAGGACTAACTGCCTTGCTGAAGAGAGCAGCTGCATATGGAAAAATGATAAACTCATCCAAGAGATGACTTTAAGATTGAGAAACGTAAAGAGTGGGGAAATAACTGTGGAAATTGGATAG 483 0.3934 MTLISMENILGLIKLRIKRASNLKACDTRTSDPYVFVTMAEQQLKTTVVKDTCNPEWNEELTLYVTNVNIPILLTVTDKDTFTVDDNMGDAEIDLKPYLQCVKMELSDLPEGHIVKKVQQDRTNCLAEESSCIWKNDKLIQEMTLRLRNVKSGEITVEIG* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0993 160 Gene3D C2 domain 8 160 IPR035892 -
Pvu2g0993 160 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 105 IPR035892 -
Pvu2g0993 160 Pfam C2 domain 12 97 IPR000008 -
Pvu2g0993 160 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 6 159 - -
Pvu2g0993 160 SMART C2_3c 12 107 IPR000008 -
Pvu2g0993 160 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Pvu2g0993 160 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 6 159 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0993 Pvu-Chr2 17921506 17924314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0993 43 157 C2H2 Transcription Factor Family AT1G70790 55.556 1.65e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0993 - - pvu:PHAVU_002G096400g 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0993 2 17921506 17924314 Pvu2g0993 2 17921506 17924314 ECH
Pvu2g0993 2 17921506 17924314 Pvu4g1597 4 43186492 43189050 ECH
Pvu2g0993 2 17921506 17924314 Pvu1g2386 1 49208369 49210769 ECH