Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0970 ATGGTTGTGGAGGCGCTCCAAGTTGTTCATCAGCATTTAATGGTTTCCACCAGGGCGGATAAGAGTGCAGAATCGAACTCCTCTGCCGCCAATGGCGTTAAAGGAGCTAAGGATCCGAAGAAATTGGAAGAATCAAAGGCTTCTCCGACTCCGCCGCGGAGGTCCAGCGCTCGAATTCAAGCGCTGCAGAAAGCGGAGAAGCTGCAGAAAGCGGAGAAGGCACTAAATGGACCAAATGCGGAGGTAGTTAAGGAGAACAACTGCCTAATCGATGTTCAGGCAAGGAAGGGTAAGAAGCGCAGTAGAAAGCGAGGCGGCGAGAAAAGTATGGTGGTGGAAGAAGAGAATGTTTTGCCGCCGAAGAAGAAGCCGTTGGCGTGCGGCAAGGGTGAGGTGGAAGTAGAGAATGGGAAGGAGGAACCGGACAATGCGAATGGGGCTTTTGGAGATAAAAGTGACTTTGTAAAAGTCAAAGAGACTATAAGATTATTCAACAAACATTATCTTCAATTTGTCCAGGTAGAAGAGAAGAGGTGTGGAAAGGCTGAGGCTGACGCTGAGCAGATAGATGCTAAAAAGCCTTCTCAGAAGGCTTCAAAGTCGAAGAAAGGTGATCCACCTCAAGATTCAAAGACCACGGCTAAACGACCAGATCTTAAGGCCATAACGAAGATGATGGGAAATAATGAGATACTGTACTCTGAGAAAAGAATTGGCAGCATTCCAGGTATTGAAGTTGGGTATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCACTGGTTAAATGGTATTGATTATATGGGCCAGTCTTATGCCAAAGCTTATAGCTATGAATTTCCAGTTGCTGTTGCAATTGTTTTATCTGGCATGTATGAGGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGTCATAATCTGACTGGTGATAAGCGTCAAATTAAGGATCAAAAGTTGGAGCGCGGGAACCTAGCTCTCAAGAATTCTGCGGAGCAATGTGTGCCTGTTAGAGTGATTCGAGGTCATGATTCTTCAAGTAGTTACTCTGGTAAAGTGTACACATATGATGGCTTGTACAAAGTTGTCAATCATTGGTCAGAGACAGGGATATCTGGATTTAAAGTCTTTAAGTTTCGACTTAGGAGGCTTGAAGGGCAACCTACATTAACCACGAATCAGGTATATTTTACTAATGGACGTGTACCTCAATCTATAGCAGAAATACGAGGTTTGGTTTGTGAGGATATCACTGGAGGTCAAGAAGATATACCCATTCCGGCTACAAATGTGGTAGATGATCCCCCTGTTCCACCCACAGGTTTCACATACCTTAAGTCTGTTAAGGTAGCAAAAAATGTGAAACTTCCCACTAATGCCACTGGATGCAAATGCAAAGGCTCCTGTAATGACCCAACAACATGTGCATGTGCTTTGCGTAATGGCTCTGATTTTCCCTATGTATCTCGGAATGGTGGCAGGTTAGTAGAAGCCAAAGATGTAGTATTTGAATGTGGCCCCAAATGTGGTTGTGGTCCTGGTTGTGTCAACCGAACTTCTCAAAAAGGACTTAGATATCGTCTGGAGGTTTTCCGGACTGCCAAAAAAGGATGGGCTGTAAGATCCTGGGATTTTATACCTTCTGGAGCACCAGTTTGTGAGTACACAGGAATACTTGGTAGAACGGAAGACATGGACAGCGTGTTGGAAAACAATTATATTTTTGAGATAGATGGCTTGCAAACAATCAAGGGCCTTGGTGGCAGAGAGAGGAGGTCAAAAGATGGAGAGATTCCTGAAGATATTTTGAACAAATATGATGATCAAAGTTCCGAAAGTGTGCCAGAGTTTTGTATTGATGCAGGGTCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATCTGTTTGTTCAGTGTGTTTTGAGCACACACGATGATTTGAGGTTGGCTCGTGTCATGCTGTTTGCTGCGGACAACATACCTCCTTTGCAGGAATTAACCTATGACTATGGTTATGCGCTGGATAGCGTGTTGGACTCCGATGGGAAGATCAAGCAAATGGCATGCTATTGTGGAGCCGCAGACTGCAGGAAGCGATTATTCTAA 2142 0.443 MVVEALQVVHQHLMVSTRADKSAESNSSAANGVKGAKDPKKLEESKASPTPPRRSSARIQALQKAEKLQKAEKALNGPNAEVVKENNCLIDVQARKGKKRSRKRGGEKSMVVEEENVLPPKKKPLACGKGEVEVENGKEEPDNANGAFGDKSDFVKVKETIRLFNKHYLQFVQVEEKRCGKAEADAEQIDAKKPSQKASKSKKGDPPQDSKTTAKRPDLKAITKMMGNNEILYSEKRIGSIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDYMGQSYAKAYSYEFPVAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIKDQKLERGNLALKNSAEQCVPVRVIRGHDSSSSYSGKVYTYDGLYKVVNHWSETGISGFKVFKFRLRRLEGQPTLTTNQVYFTNGRVPQSIAEIRGLVCEDITGGQEDIPIPATNVVDDPPVPPTGFTYLKSVKVAKNVKLPTNATGCKCKGSCNDPTTCACALRNGSDFPYVSRNGGRLVEAKDVVFECGPKCGCGPGCVNRTSQKGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILGRTEDMDSVLENNYIFEIDGLQTIKGLGGRERRSKDGEIPEDILNKYDDQSSESVPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHDDLRLARVMLFAADNIPPLQELTYDYGYALDSVLDSDGKIKQMACYCGAADCRKRLF* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0970 713 ProSiteProfiles Post-SET domain profile. 697 713 IPR003616 -
Pvu2g0970 713 MobiDBLite consensus disorder prediction 106 150 - -
Pvu2g0970 713 Gene3D SET domain 415 713 IPR046341 -
Pvu2g0970 713 ProSiteProfiles SET domain profile. 534 683 IPR001214 GO:0005515
Pvu2g0970 713 MobiDBLite consensus disorder prediction 185 218 - -
Pvu2g0970 713 SUPERFAMILY SET domain 419 689 IPR046341 -
Pvu2g0970 713 ProSiteProfiles YDG domain profile. 239 391 IPR003105 -
Pvu2g0970 713 ProSiteProfiles Pre-SET domain profile. 469 531 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0970 713 SMART G9a_1 234 395 IPR003105 -
Pvu2g0970 713 MobiDBLite consensus disorder prediction 17 150 - -
Pvu2g0970 713 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 53 712 - -
Pvu2g0970 713 Gene3D - 222 408 IPR036987 -
Pvu2g0970 713 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 5 713 IPR025794 GO:0016571
Pvu2g0970 713 Pfam SET domain 545 683 IPR001214 GO:0005515
Pvu2g0970 713 SMART preset_2 422 518 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0970 713 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 53 712 - -
Pvu2g0970 713 SUPERFAMILY PUA domain-like 221 413 IPR015947 -
Pvu2g0970 713 Pfam Pre-SET motif 426 526 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0970 713 Pfam SAD/SRA domain 238 395 IPR003105 -
Pvu2g0970 713 MobiDBLite consensus disorder prediction 18 32 - -
Pvu2g0970 713 SMART set_7 534 689 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0970 Pvu-Chr2 17021041 17024221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0970 225 713 EF-hand Containing Proteins AT5G13960 67.343 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu2g0970 SAD_SRA 1.1e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0970 K11420 - gmx:100796701 1097.42