Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0965 ATGGAAGGAAGTGGAAGAATAGAAGACTGTGATACTGGCTTTTGTGGTTCTCCTACGGTAGTTCAGATTATACAGAAGGTACTTGCAGAGTTGATAGGGACATATTTCTTAATATTTGCTGGGTGTTGCTCTGTGATTCATAATAATTCAGAAAAGACTAAAGGGCAAATAACATTTCCTGGAGTTTGCATAGTGTGGGGTTTAACAGTAACCATCTTGGTTTATTCTCTTGCTCACGTCTCTGGTGCTCATTTCAATCCAGCAGTCACTCTCAGCTTTGCTATCTATCGTTTTATCCCTTTTAAAATGGTGCCTTTGTATTTTATTGCGCAAGTATTAGGATCTTTACTTGCTAGTGGGACATTGTACCTTCTCCTTGAAATAGACGATGAATCTTATTTTGGAACAAAACCAGCAGGAGGTCATGTTCAATCTCTTATTTTTGAGTTAATAGCAACATTTCTCTTAATGTTCGTTGTCTCTGCGGTTTCAACGGATAGAAGAGCGATTGGAAAATTTGGAGGGGTTGTTGTTGGTTTGACAGTTATGGTAGACGTCTTCGTTGCTGGACCTGTGTCAGGAGCTTCTATGAACCCAGCAAGAAGCCTTGGACCTGCTTTGGTGATGCATGTTTACAGTGGATTTTGGGTTTATATAGTTGGACCATTTGTTGGTGCGTTACTTGGTGCCACATGTTATAACTTGATTAGACACACTGATAAACCACTTAGGGATATTGGCTCCAATTCAATAATACTTCAAATAGCATCTAAAAGCTTTCGATAG 786 0.3931 MEGSGRIEDCDTGFCGSPTVVQIIQKVLAELIGTYFLIFAGCCSVIHNNSEKTKGQITFPGVCIVWGLTVTILVYSLAHVSGAHFNPAVTLSFAIYRFIPFKMVPLYFIAQVLGSLLASGTLYLLLEIDDESYFGTKPAGGHVQSLIFELIATFLLMFVVSAVSTDRRAIGKFGGVVVGLTVMVDVFVAGPVSGASMNPARSLGPALVMHVYSGFWVYIVGPFVGALLGATCYNLIRHTDKPLRDIGSNSIILQIASKSFR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0965 261 Gene3D Glycerol uptake facilitator protein. 12 246 IPR023271 -
Pvu2g0965 261 SUPERFAMILY Aquaporin-like 21 242 IPR023271 -
Pvu2g0965 261 CDD MIP 25 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g0965 261 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Pvu2g0965 261 PRINTS Major intrinsic protein family signature 25 44 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g0965 261 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g0965 261 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g0965 261 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g0965 261 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g0965 261 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g0965 261 PANTHER AQUAPORIN NIP4-1-RELATED 14 246 - -
Pvu2g0965 261 PANTHER AQUAPORIN NIP2-1 14 246 IPR034294 -
Pvu2g0965 261 TIGRFAM MIP: MIP family channel proteins 29 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu2g0965 261 Pfam Major intrinsic protein 21 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0965 Pvu-Chr2 16870832 16872159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0965 4 261 Major Intrinsic Protein MIP AT5G37810 54.198 5.32e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0965 K09874 - gmx:100819179 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0413 3 4302953 4305618 Pvu2g0965 2 16870832 16872159 PCT