Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0950 ATGGAAACAACGACCAAGACCATTTTCTCATTCTTTTTACTCTCCTCACTCCTACTTCACCTTTATTTTTCTCAAGGGGTAGCACAAGAGGTGGCAAAATCCGAGAGCGAAGCATTAGGGGAAGCAGAGAAAAGAGAAACATTAGAAATTATAATAGGTGGTGGAGGTTCCCCTGCTCCTTACCCTGTTCCCTCCCCTGAAACTCCATGCCCACCTCCCCCACCTAAACCGCTTAGCCGTTTAGAGAGAGCTCGTCGCGTGCTTCTCAATTTCAAAACCCTCATTCTTGACCCGACATGTTACACGCAAAACTGGAACGAGAACACTGACACGTGTGACTTCAGAGGGGTACGATGTGCCTCATATCCAAACTCAGAAGAGCGAGCAGTTGCAGGACTGGACTTAAATGGAGCAAGAGTGACGGGTCAAAACGGGTGCCCTTTGCCCGTCTCATCTCTCTTGGGCGTGAACCAAATACCCGAGTTAACATTCTTCCACGTCAACTCTAACAGCTTCGCCGGCTCGGTCCCCACGGATATCACCAAATTCCCCTTCTTCTTCGAGCTCGATCTCAGTAACAACAAAATCAAAGGCCAGTTTCCCATCGACGCGATTACGTCAAAAGTGCTAGTCTTCCTTGACCTCCGCTTCAATCAACTCACCGGCCCAATTCCCCCCCAACTCTTCCTGAAGGATCTCGACGTCATCTTCATCAACAACAACCAATTCACACAGTGTCTCCCCCAGAATTTCGGCTACACACCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCCCCATTCCAAAGAGCGTCGGTTACGCACCCAACCTTACCGAAGTTCTCTTCCTCGGGAACAAGTTTGACGGCTGCTTGCCCGTTGAAATTGGAAACCTAAAAAGAGCTGTCGTGTTTGATGTGAGTAAAAATTTACTCACCGGCCCAATTCCCCACTCCTTCGGGTGCTTGAAGAGCATTCAGTATCTCAATTTGGCGCAAAACAAATTCTACGGCTGTGTTCCCGACAATGTTTGTCAAATTTCTTCTCTCCGCAACAATGGTAATCTTTCCTTGGCCGACAATTATTTCAACGACGTTGGCCCCTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAAGAATTGCATCCGGGGGCTCCCAAACCAAAGGTCGCCCTATGAATGCTCCCAGTTTTACAAGAGGAAAACGACGTGTCCGAATCCGAGTTCTTTCTACTATGTGCCGTGTAGGGGAAACCCCAGTTCCGAAACCACTGGTTCAACTTCTGCGCCGGTGACTTACAAGACTCTCAAACCGCATCGTCTGAGATTGTGA 1350 0.4904 METTTKTIFSFFLLSSLLLHLYFSQGVAQEVAKSESEALGEAEKRETLEIIIGGGGSPAPYPVPSPETPCPPPPPKPLSRLERARRVLLNFKTLILDPTCYTQNWNENTDTCDFRGVRCASYPNSEERAVAGLDLNGARVTGQNGCPLPVSSLLGVNQIPELTFFHVNSNSFAGSVPTDITKFPFFFELDLSNNKIKGQFPIDAITSKVLVFLDLRFNQLTGPIPPQLFLKDLDVIFINNNQFTQCLPQNFGYTPARYLTFANNNLTGPIPKSVGYAPNLTEVLFLGNKFDGCLPVEIGNLKRAVVFDVSKNLLTGPIPHSFGCLKSIQYLNLAQNKFYGCVPDNVCQISSLRNNGNLSLADNYFNDVGPSCWSLIKSKVLDVSKNCIRGLPNQRSPYECSQFYKRKTTCPNPSSFYYVPCRGNPSSETTGSTSAPVTYKTLKPHRLRL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0950 449 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 32 433 - -
Pvu2g0950 449 PANTHER BNAC05G26270D PROTEIN 32 433 - -
Pvu2g0950 449 Gene3D Ribonuclease Inhibitor 255 409 IPR032675 -
Pvu2g0950 449 SUPERFAMILY L domain-like 83 390 - -
Pvu2g0950 449 MobiDBLite consensus disorder prediction 55 76 - -
Pvu2g0950 449 Gene3D Ribonuclease Inhibitor 81 254 IPR032675 -
Pvu2g0950 449 Pfam Leucine rich repeat N-terminal domain 84 119 IPR013210 -
Pvu2g0950 449 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0950 Pvu-Chr2 16046657 16048624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0950 80 410 Trihelix Transcription Factor Family AT1G12040 40.950 2.75e-74 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0950 - - gmx:100796207 637.491