Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0939 ATGGCGGGCGGCGGAAGTGGGAACCGGCCGCCGTGGAAGGAGGCGGCGCCGCCTCGACCCACCATCAGTCTCCCTCCAAGGGCTGCTTCCATGGAGACCCTTTTCAATGGTGGCTTCAGCCCTGGTCCCATGACTCTTCTCTCTGGCTTTCTGACTGATGGGGATGACTGCAACAAGTCCTTCTCTCAGCTCCTCGCCGGAGCCATGGCTTCTCCGGTGGCCGCCGCCGTGCACGACTCATCTGGCTTCTTTTCACCTTCTCAGGTGTCATTTGGAATGACACACCAGCAGGCAATAGCCCAAGTTTCAGTGCAGGCTTCACAAGCTAACTCAAACATGAATATCCACCCTGAACATTCAATGTCTGTATCAGTATCATCACCTACCTCATTCACACAGGTTCCTGCAGCTACTTCCAATACCAAACAACAGCTCATTCCACCCTTAACTGCAGACTCTCGGGCCACAATGACCGAATTCGCTCATCATTCTCACTCTGAACAAAAATTGCAATCTTCATCACTGAATGTTGATAAGCCTGCAGATGATGGCCACAACTGGAGGAAGTATGGACAGAAACAGGTGAAGGGTAGTGAATTTCCTCGAAGTTATTACAAATGCACACATCCACACTGTCCTGTCAAGAAAAAGGTTGAACGTTCACTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAACACAACCATCAACGTCCTCTTCCTAACAAGCGCTCAAAAGATGCTTTGACTTCAAATGAAAATTCAAATATGCAATGGAATGCTTCTGCTTATCAAGGGACTACTAAGATGGATCCAGAGTCAAGTCAGGCAACAGCTGATCATCTATCAGGAAGTGACAGTGAGGAAGTAGGTGATCATGAAGCTGAAGAGGATGAGAAAAATGTTGAGCCTCACCCCAAGAGGAGTAAAACAGAAGTCACAAATTTAGATCCAACATTTTCACATAGGACTGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTTTTAGATGATGGTTACAGATGGCGAAAATATGGGCAGAAAGTAGTCAAAGGCAACCCTTATCCGAGGAGTTATTACAAATGTACAACCCCGGGTTGTAAGGTCCGAAAGCATGTTGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATACGAAGGAAAACACAATCATGATGTTCCAGCAGCTAAGACCAGCAGCCACGTTATGGCTGGTAACACTTCACAGATAAAACCACAAAACTCCAATCCTGGAAAACATAGTTTTGGCACCAGAGATATTGGTGGCAATGAACAGCAGCCGGTTGCACGGCTTCGGTTGAAGGAAGAGAAGATAACCTAG 1365 0.4652 MAGGGSGNRPPWKEAAPPRPTISLPPRAASMETLFNGGFSPGPMTLLSGFLTDGDDCNKSFSQLLAGAMASPVAAAVHDSSGFFSPSQVSFGMTHQQAIAQVSVQASQANSNMNIHPEHSMSVSVSSPTSFTQVPAATSNTKQQLIPPLTADSRATMTEFAHHSHSEQKLQSSSLNVDKPADDGHNWRKYGQKQVKGSEFPRSYYKCTHPHCPVKKKVERSLEGHVTAIIYKGEHNHQRPLPNKRSKDALTSNENSNMQWNASAYQGTTKMDPESSQATADHLSGSDSEEVGDHEAEEDEKNVEPHPKRSKTEVTNLDPTFSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCKVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHVMAGNTSQIKPQNSNPGKHSFGTRDIGGNEQQPVARLRLKEEKIT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0939 454 MobiDBLite consensus disorder prediction 266 322 - -
Pvu2g0939 454 MobiDBLite consensus disorder prediction 412 454 - -
Pvu2g0939 454 ProSiteProfiles WRKY domain profile. 337 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 MobiDBLite consensus disorder prediction 412 429 - -
Pvu2g0939 454 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 76 IPR044810 GO:0003700
Pvu2g0939 454 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 75 453 IPR044810 GO:0003700
Pvu2g0939 454 SMART WRKY_cls 342 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 SMART WRKY_cls 181 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 MobiDBLite consensus disorder prediction 1 24 - -
Pvu2g0939 454 MobiDBLite consensus disorder prediction 159 195 - -
Pvu2g0939 454 ProSiteProfiles WRKY domain profile. 182 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 Gene3D WRKY domain 165 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 Gene3D WRKY domain 327 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 MobiDBLite consensus disorder prediction 266 284 - -
Pvu2g0939 454 SUPERFAMILY WRKY DNA-binding domain 179 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 SUPERFAMILY WRKY DNA-binding domain 334 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 75 453 - -
Pvu2g0939 454 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 14 76 - -
Pvu2g0939 454 Pfam WRKY DNA -binding domain 343 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 Pfam WRKY DNA -binding domain 182 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0939 454 MobiDBLite consensus disorder prediction 298 313 - -
Pvu2g0939 454 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0939 Pvu-Chr2 15467166 15471721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0939 19 65 WRKY Transcription Factor Family AT2G03340 63.265 4.00e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g0939 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0939 - - gmx:100127369 707.212