Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0926 ATGTCTCGGGTTCTTCGCTCCCTTTTAACCTTAAAGCATCTCTCACTACCGTTCCGCTCTTTTGTTCCTCCCAAGTTCATTGTTCCTTTGAACCGGAACTTTTCTTTCATTTTCCCAACATCACTCTCTGTCAGATGCAACCACTCCAATCTCGTTGAACCATTCCCACCACTGCCACAAAATCCTCCAGTTACAAAATTTCCGCTAAGGGTGTACGCAGATTACTCCGTTTACACATCGAAGGGTGTTCTCACCTTGGCTCCTAAACCTCCGGGATTTGAATCAAAAGCCTCTGGGGCGTTTGGGGTGTCTAGGGAAGGTTATATGTTGCTCCAGTTTGCTCCTTCGGTTGGTACTGAAGAATCCATATATGATTGGAACCAAAAGCAGGTATTCTCACTTTCCGTTAGTGAAATGGGAACTGTAATTAGCCTTGGTGAAAAGGATTCTTGGGAATTTTCTCGTAAGAGTGCTAAGCCAAATAGCAATGGAATTGAAGTCAGAAAAGTTTTGAAGGTGGAGCCACTTGTGGATGCTACTGGTCACTCATTTAGCTTAAGTGTTTATAAAAAACCTGCGACCATGGAGGAAATTGAGGAAAACATCTATCTCCCTGTTACAAGGGCACATCTAGCAGTTTTAAGGTCAATTTTCAATTATATCATGCCGTACCTTCTAGGTTGGAATGCCTTTGCAAGCACCGTAAAGCCAGAGGTATATAGTCAAGTAAACAGTGCCAACCCCAGATACAGTGCAAACAATGAACGGAAAAGATAG 777 0.4311 MSRVLRSLLTLKHLSLPFRSFVPPKFIVPLNRNFSFIFPTSLSVRCNHSNLVEPFPPLPQNPPVTKFPLRVYADYSVYTSKGVLTLAPKPPGFESKASGAFGVSREGYMLLQFAPSVGTEESIYDWNQKQVFSLSVSEMGTVISLGEKDSWEFSRKSAKPNSNGIEVRKVLKVEPLVDATGHSFSLSVYKKPATMEEIEENIYLPVTRAHLAVLRSIFNYIMPYLLGWNAFASTVKPEVYSQVNSANPRYSANNERKR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0926 258 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 60 258 - -
Pvu2g0926 258 Gene3D Transcriptional Coactivator Pc4; Chain A 65 246 IPR009044 GO:0003677|GO:0006355
Pvu2g0926 258 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 60 258 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pvu2g0926 258 Pfam Whirly transcription factor 77 217 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pvu2g0926 258 SUPERFAMILY ssDNA-binding transcriptional regulator domain 70 255 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0926 Pvu-Chr2 14943827 14948711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0926 63 258 Whirly Transcription Factor Family AT1G14410 50.000 3.53e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Pvu2g0926 Whirly 6.1e-41 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0926 - - gmx:100797370 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0926 2 14943827 14948711 Pvu2g0926 2 14943827 14948711 ECH
Pvu2g0926 2 14943827 14948711 Pvu3g0710 3 10160407 10163562 PCT