Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0925 ATGGAACAGGCTAGAGAAGAAAACAAGATGTTGAAGTTCTTGGACATCCTTGAACAAGATAAACCTGAAGATGCTACAAATGCTAAAGGTGTAAGTAGCCAAAGTGAAGAGAGTGAACCTTTGTCACTCTCTCTTGGGATATCATTCAAAGGAAAGATTAAGGGTAAGAGGAAGCAAGATGAGGGTATGGATAGAGGACTCACACTTGGGTTAGATATCAATTTGGATCCTGTAGATCATGCTGAAGCTGCAAATATTTCCAGCTCTGCAAGTAGCTTAGGTGGAGGGAAGGAAGAGGAACCAAGTGAGATGTGGCCACCCAGTAAAGTTTTAAAGACAATGAAAAATGTGGATAAAAGTGAAGCTTTTCAAAATGATCAGCCCAAGAAGACTAGGGTTTCCATTAGAGCCAGATGTGATACACAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATGGCAAAAGGAAATCCATGTCCCCGAGCTTACTATCGATGCACTGTTTCTCCATTGTGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAAGACATGTCCATATTGATCACAACCTATGAAGGAACCCACAATCATCCACTGCCTATGTCAGCCACTGCAATGGCCTGCACAACTTCTGCTGCAGCTTCCATGCTCCAATGTCCCTCACTGAGTTCAGAGCATGGACATGGACTAGTCAATTCAGCTATATCCTCCATTACCAAATTTAGTGCTCCTAATTACAACCCTCATAATGCTCTAAACTTCTCCACATACCAAATTTCAAGACCACATCAATTCTACTTTCCAAACTCATCTATTTCAAGCTTGAATTATCACCCCACAATCACTTTGGACCTTACAGCACCCCCAACAGCCTCAAACTCAAGCTTCCCTCACATGCCAAAATACTCATCAACAAACCTTAATTTTTCCTCAGATTTCTCTCCTCCACAATCTATCATGCCTCCATCACCTTGGAGCAGTTACAGTGGTTACTTCAACTCAAGAGCACTAACTCATAATATAAACCATGGTGGTTACTTCTTAAACCCTGGAAGTCAAAATCAGCCTCTTGAGCATCTCCATCAACCTATTTGCATGACCAACAATAACTTTCCTCAACGGTTTTTGCCGGATTCCATTATTGCTGCAACCAAGGCAATCACAAGCAATCCAAAATTTCACTCAGTGTTAGCAACTGCCCTCACAACATATGTTGGCAATGGAGCCAGTGGTGATACGTTAAGAGAAAACCATGTTCTTGAGAATGCAGAACTGAGCTTAAAGCTGTGTAGTGAAAAATAG 1317 0.4169 MEQAREENKMLKFLDILEQDKPEDATNAKGVSSQSEESEPLSLSLGISFKGKIKGKRKQDEGMDRGLTLGLDINLDPVDHAEAANISSSASSLGGGKEEEPSEMWPPSKVLKTMKNVDKSEAFQNDQPKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCTVSPLCPVRKQVQRCAEDMSILITTYEGTHNHPLPMSATAMACTTSAAASMLQCPSLSSEHGHGLVNSAISSITKFSAPNYNPHNALNFSTYQISRPHQFYFPNSSISSLNYHPTITLDLTAPPTASNSSFPHMPKYSSTNLNFSSDFSPPQSIMPPSPWSSYSGYFNSRALTHNINHGGYFLNPGSQNQPLEHLHQPICMTNNNFPQRFLPDSIIAATKAITSNPKFHSVLATALTTYVGNGASGDTLRENHVLENAELSLKLCSEK* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0925 438 Pfam WRKY DNA -binding domain 145 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0925 438 MobiDBLite consensus disorder prediction 26 42 - -
Pvu2g0925 438 MobiDBLite consensus disorder prediction 1 25 - -
Pvu2g0925 438 SUPERFAMILY WRKY DNA-binding domain 137 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0925 438 PANTHER WRKY TRANSCRIPTION FACTOR 72B 3 424 - -
Pvu2g0925 438 SMART WRKY_cls 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0925 438 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 3 424 IPR044810 GO:0003700
Pvu2g0925 438 Gene3D WRKY domain 129 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0925 438 MobiDBLite consensus disorder prediction 1 45 - -
Pvu2g0925 438 ProSiteProfiles WRKY domain profile. 139 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0925 Pvu-Chr2 14907240 14909229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0925 53 427 WRKY Transcription Factor Family AT5G15130 40.199 5.91e-60 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g0925 WRKY 4.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0925 - - pvu:PHAVU_002G089700g 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0925 2 14907240 14909229 Pvu2g0925 2 14907240 14909229 ECH
Pvu2g0925 2 14907240 14909229 Pvu3g1984 3 40445375 40449886 ECH
Pvu2g0925 2 14907240 14909229 Pvu9g1959 9 28139133 28142787 ECH
Pvu2g0925 2 14907240 14909229 Pvu8g0437 8 3709079 3711997 ECH
Pvu2g0925 2 14907240 14909229 Pvu3g1984 3 40445375 40449886 PCT
Pvu3g1287 3 30385985 30389924 Pvu2g0925 2 14907240 14909229 PCT