Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0920 ATGGGGAAAGGAAGAAGTCCTGGCAAATGGTTCAAGAACTTACTCTTGGGGAAGAAATCGTCGTCAAAGTCTACTTCATCAAAGAAGAATGATATTCTTAAACCATCAAGTGATAAGGATGTGGTGGTGTCTTCTGAGGTACCTGTGTCTGATCCACCTGTTAATTCTCTGCTGATATCGCCGCCGCCGCCGATATCTGGAGCTAATGATACTAAAGTAGTGCTTTCAGAAAAGGAGGTAGTTAGTAGATCTTCACTTGATAAGAATGTTCTTTCAACTGGAGATGAAGAGGCTAAGGTGCAGGATGTGGCTAATTTTGGATCTCAAGAGGATACTGAGAAACTTCAGCTTACAGAAGCAGCTATAAAAGTTCAGGCCGCTTGTAGAAGCTATCTGGCTCGTCAAACATTTCAAACTCTCAGAGGTGCCATACAACTACAATCTCTCATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATACTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGCTCGTGGTTGCAATGTTAGACGTTCTGATATTGGGCATGCAGTCCAGAAAATTTGTAAGGATACTCATTGTTCAAATTCTATTTCGGTAGTTTCATCCTCACAGAAAGAGAAGCTGTCTGAAAATGTATTTGTTTGCAAGCTTCTGGCTTCATCCCCATATGCAGTTCCTCTATCACTCTCCATTGATCAAGAAGAAACTAACTTGGCTTGGAAGTGGCTTGACTATTGGACACAGTCACACTTTTGGGCACCTCTTCCTGAATTGAAAAAGAAATTTGATTCAGTGTTTGATGAGAAAAATGGAAGTTCCCAGACAGTTCAAAGGGGACAAGTTAAAAGAACTACTCGAAAATCTTCTGCTGTGAAAGCTGACAATGGCTCAGTTTTAGTTGCTAACAGATCTAAACAGCGTCCAAAAAAGGATTCAAGCCATCCATTGCCAACAGCTCAGGAACACCCTCAAAAAGAAACTGCGAAATGTAGTCTTGAAAAAAAACACGCACATAATGTTTCAAATGGATCTGAGGTTGTTAATGAAAAAAGAAAACACAGCAGTAGAAAGATTTTAGATCATACTGTCACTGATGTTTTAGAGCAGGGCCCAAGTGCCTCTTCAGAGAAAATGGAAGATTTGGCAGTTGCAAAGTCAGAAAAGTCTGATCCTGAGAAGGGTCATGGACAGCCAGCAAAAGATGAGAATGATAATGAGCCACATCATGATCCTATTGCTGTTTCAAAGACTAGCGTGAAGAAGGATGAAAATGAAAAAAATCAAGGAGTTGGTGAGGATCGGAACGGTGGTGATGATAATTGTATCAGTAACAATTCCCAGAGAAGAGCTTCACTACCTGCGAACTTTAATGATCAAGATAATGAGTTATATACCACTCCTGTTACTCCAAGGCTGCCCAGTTATATGGCTCCTACCGAATCTGCAAAGGCTAAGCTCAGAGGACAAAGCTCTCCAAGATTTGCTACTGATTTGGTAGAAAAGAGCAATACAACCAGGCGACATTCACTTTCATCCTCACTCAATGGCCGGTCAGGTTCATTTTCCCCGAGAGATGAAAGGCTGATGGCTGTGAGTGGCAGAGGAGTGATAAGGTCTGATAGATCTCTGTCATCTTCAAGGGATGGAACTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1701 0.4156 MGKGRSPGKWFKNLLLGKKSSSKSTSSKKNDILKPSSDKDVVVSSEVPVSDPPVNSLLISPPPPISGANDTKVVLSEKEVVSRSSLDKNVLSTGDEEAKVQDVANFGSQEDTEKLQLTEAAIKVQAACRSYLARQTFQTLRGAIQLQSLIRGHLVRRQAVSALYCVKGIVKFQALARGCNVRRSDIGHAVQKICKDTHCSNSISVVSSSQKEKLSENVFVCKLLASSPYAVPLSLSIDQEETNLAWKWLDYWTQSHFWAPLPELKKKFDSVFDEKNGSSQTVQRGQVKRTTRKSSAVKADNGSVLVANRSKQRPKKDSSHPLPTAQEHPQKETAKCSLEKKHAHNVSNGSEVVNEKRKHSSRKILDHTVTDVLEQGPSASSEKMEDLAVAKSEKSDPEKGHGQPAKDENDNEPHHDPIAVSKTSVKKDENEKNQGVGEDRNGGDDNCISNNSQRRASLPANFNDQDNELYTTPVTPRLPSYMAPTESAKAKLRGQSSPRFATDLVEKSNTTRRHSLSSSLNGRSGSFSPRDERLMAVSGRGVIRSDRSLSSSRDGTEKLIQPQWRR* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0920 566 MobiDBLite consensus disorder prediction 386 439 - -
Pvu2g0920 566 MobiDBLite consensus disorder prediction 501 526 - -
Pvu2g0920 566 MobiDBLite consensus disorder prediction 17 31 - -
Pvu2g0920 566 SMART iq_5 116 138 IPR000048 GO:0005515
Pvu2g0920 566 SMART iq_5 139 160 IPR000048 GO:0005515
Pvu2g0920 566 Pfam Protein of unknown function (DUF4005) 465 545 IPR025064 -
Pvu2g0920 566 MobiDBLite consensus disorder prediction 332 369 - -
Pvu2g0920 566 MobiDBLite consensus disorder prediction 444 474 - -
Pvu2g0920 566 MobiDBLite consensus disorder prediction 1 63 - -
Pvu2g0920 566 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Pvu2g0920 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 183 IPR027417 -
Pvu2g0920 566 MobiDBLite consensus disorder prediction 275 566 - -
Pvu2g0920 566 PANTHER IQ-DOMAIN 5-RELATED 1 563 - -
Pvu2g0920 566 MobiDBLite consensus disorder prediction 544 558 - -
Pvu2g0920 566 Gene3D - 114 164 - -
Pvu2g0920 566 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Pvu2g0920 566 MobiDBLite consensus disorder prediction 275 298 - -
Pvu2g0920 566 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Pvu2g0920 566 Pfam IQ calmodulin-binding motif 118 138 IPR000048 GO:0005515
Pvu2g0920 566 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0920 Pvu-Chr2 14854424 14859816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0920 4 566 IQD Protein Family AT1G14380 35.275 4.49e-77 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0920 - - gmx:100800548 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0920 2 14854424 14859816 Pvu2g0920 2 14854424 14859816 ECH
Pvu2g0920 2 14854424 14859816 Pvu3g1981 3 40422342 40430126 ECH
Pvu2g0920 2 14854424 14859816 Pvu9g1957 9 28104208 28111942 ECH
Pvu2g0920 2 14854424 14859816 Pvu3g1981 3 40422342 40430126 PCT