Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0919 ATGGGTAACTGCCTAGATTCTTCTGCCAAAGTTGATGCAGCTCAGAGTTCCAGATCCACTTCTGGAATCTCTAAAGCTACACCTTCCAGTTTATCTATTCCATCATACAGTGAAAAAAGCAACGCCTTAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCCAATCTCAAGTCCTTCACATTCAATGAGCTGAAGAATGCCACCAGAAATTTTCGGCCTGATAGTCTTCTCGGTGAAGGGGGATTTGGGTGCGTCTACAAAGGATGGATTGATGAACACACATTTACAGCTTCAAAGCCTGGATCAGGAATGGTTGTTGCTGTAAAGAAGCTCAAACCTGAAGGTTTTCAAGGTCATAAAGAGTGGTTGACTGAGGTTAACTACCTTGGACAACTGTACCATCCTAATTTGGTGAAATTAATTGGTTACTGCTTGGAGGGAGAGAATCGGCTATTGGTCTATGAGTTTATGCCAAAAGGGAGCTTGGAGAACCATCTGTTTAGAAGAGGACCCCAACCACTCTCTTGGTCAGTGAGGATGAAAGTGGCTATTGGTGCTGCTAGAGGACTCTCTTTTCTTCATAACGCCAATTCACAAGTCATATACCGTGATTTTAAAGCCTCTAATATCCTACTTGATGCGGAGTTCAATGCTAAACTTTCTGACTTTGGTTTAGCTAAGGCGGGTCCTACTGGTGATAGAACTCACGTCTCTACTCAAGTCATGGGTACTCAAGGATATGCAGCACCTGAATATGTTGCAACTGGTAGGTTGACAGCCAAAAGTGATGTCTACAGCTTTGGAGTTGTGTTGCTTGAACTTTTATCTGGAAGACGTGCAGTTGATAAAACAATATCTGGTATGGAGCAGAATCTGGTGGACTGGGCAAAGCCATATTTGAGCGACAAACGAAGACTGTTCCGGATCATGGATACCAAGTTGGAGGGGCAGTACCCGCAAAAGGGTGCCTTCATGGCTGCCACACTTTCTCTACAATGCCTCAACACTGAGGCCAAGACAAGGCCTCCAATGACAGAGGTTTTAGCCACTCTGGAACAGATAGAAGCCCCCAAAACTACAACCAGAAACTCTCATTCTTCAGAACACCATAGAGTTCACACTCCTGTGAGAAAATCTCCTGCCCGAAATCGGTCACCTCTAAATCTAACTCCTACCGCATCCCCTCTTCATGCTCACCGGCAATCGCCTCGTGTGCACTGA 1233 0.4526 MGNCLDSSAKVDAAQSSRSTSGISKATPSSLSIPSYSEKSNALSLPTPRSEGEILSSPNLKSFTFNELKNATRNFRPDSLLGEGGFGCVYKGWIDEHTFTASKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNANSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTISGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKGAFMAATLSLQCLNTEAKTRPPMTEVLATLEQIEAPKTTTRNSHSSEHHRVHTPVRKSPARNRSPLNLTPTASPLHAHRQSPRVH* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0919 410 MobiDBLite consensus disorder prediction 385 401 - -
Pvu2g0919 410 MobiDBLite consensus disorder prediction 358 410 - -
Pvu2g0919 410 MobiDBLite consensus disorder prediction 1 53 - -
Pvu2g0919 410 ProSiteProfiles Protein kinase domain profile. 75 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0919 410 Pfam Protein tyrosine and serine/threonine kinase 79 354 IPR001245 GO:0004672|GO:0006468
Pvu2g0919 410 Gene3D Transferase(Phosphotransferase) domain 1 161 382 - -
Pvu2g0919 410 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 11 408 - -
Pvu2g0919 410 Gene3D Phosphorylase Kinase; domain 1 51 160 - -
Pvu2g0919 410 ProSitePatterns Protein kinases ATP-binding region signature. 81 114 IPR017441 GO:0005524
Pvu2g0919 410 CDD STKc_IRAK 81 358 - -
Pvu2g0919 410 MobiDBLite consensus disorder prediction 9 53 - -
Pvu2g0919 410 SUPERFAMILY Protein kinase-like (PK-like) 47 355 IPR011009 -
Pvu2g0919 410 PANTHER OS01G0588500 PROTEIN-RELATED 11 408 - -
Pvu2g0919 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0919 Pvu-Chr2 14730389 14733770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0919 51 355 Glycoside Hydrolase AT3G07070 53.247 4.65e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu2g0919 PK_Tyr_Ser-Thr 9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0919 - - gmx:100809778 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0919 2 14730389 14733770 Pvu3g1978 3 40380397 40387713 PCT