Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0917 ATGCAGGAAGATATGAAGAAGCAGCAGAAGCAGAAGCAGCTGGTCAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAAGAGGAGGATGATATACTCAGGGAGCAGATTGGCATCCATGGAACTGAAAATTGGGCAATCATTGCTTCTAAATTCAAGGATAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTATTTGAATTCTGACTTCAAGAAAGGAGGATGGTCACCAGAGGAAGACATGCTTTTATGTGAGGCTCAAAAAATATTTGGGAACAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAACCGTTTCTCCACACTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACACTTCATACATCAATTCTAATAACAAAAGGACTTTTCTCCAGCACAGGTGTGATACAGATGTTGCATCAGAATCTGCAGCAGCTATTAAGAAGATGAGGAGGTCACATATCCCTGATGCTGAAGAAAAGATCAACTTTGGAGACAGAGCACATAAACAAAATGGGATTCCAATAAATCAACAGTCAAGAGCACCATTTGCAGTTTTAGCTCAAAACTCTGGCAATGTCAACTTGCCAGACCAGGATCATGTCTGCAATTTGAAGTTTAGTGATTATGCCCAAAACAAGATTCAAGGAACATTCCTTAAAAAGGATGACCCAAAGATAAATGCGTTGATGCAACAAGCAGAGTTATTAAGCTCACTAGCTCTAAAAGTTGATGCAGAGAACGTGGATCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTTAACAGAACCAAAGAATCAGACATCCCCAGATACAAAATTCCAGATTTACAACTTGTAGATCTTAAAGATTTGTTGGAGGACTTGAAGAGCAGTAGTGAGGAAGTCCAGCCATGCTGGAGGCAAATGGAACTATATGAAGACTCTCCAGGCAGTTCTGAATATAGTACAGGATCAACTCTACTGCCTCTTTCAGCTTGTGAGAATTTGGAACACTCACTACATCAGGATATTGGAACTGAACTGAATATACAAATGGGAGATCCAGAAGAAGATAGGGGATGTGACCAAGGGGTTCTTTCTAGAGCAACTCTAGATCAAGATTTATTCCCATCTTGTGAGGAACAGATAAACAATGATGGCATTGTTTCTGCCTTGTCATGTTCGGAGGAGTTCAGTTCACCTCTTCAAGTTACACCTCTGTTTAGATCCTTAACTGCTGGAATTCCTAGCCCTCAATTTTCAGAAAGTGAAAGGAACTTCCTTATGAAAACACTTGGAATGGAATCTCCATCGCTCAAACCAAGTGTCAACCCATCACAACCGCCTCTCTGCAAAAGAGTCCTCCTAATCTGA 1422 0.4079 MQEDMKKQQKQKQLVNEESKKKERHIVTWTQEEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTSYINSNNKRTFLQHRCDTDVASESAAAIKKMRRSHIPDAEEKINFGDRAHKQNGIPINQQSRAPFAVLAQNSGNVNLPDQDHVCNLKFSDYAQNKIQGTFLKKDDPKINALMQQAELLSSLALKVDAENVDQSLENAWKVLQEFLNRTKESDIPRYKIPDLQLVDLKDLLEDLKSSSEEVQPCWRQMELYEDSPGSSEYSTGSTLLPLSACENLEHSLHQDIGTELNIQMGDPEEDRGCDQGVLSRATLDQDLFPSCEEQINNDGIVSALSCSEEFSSPLQVTPLFRSLTAGIPSPQFSESERNFLMKTLGMESPSLKPSVNPSQPPLCKRVLLI* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0917 473 ProSiteProfiles Myb-like domain profile. 29 72 IPR001005 -
Pvu2g0917 473 Pfam Myb-like DNA-binding domain 29 89 - -
Pvu2g0917 473 Gene3D - 80 155 - -
Pvu2g0917 473 CDD SANT 81 122 IPR001005 -
Pvu2g0917 473 Coils Coil 5 25 - -
Pvu2g0917 473 SUPERFAMILY Homeodomain-like 25 119 IPR009057 -
Pvu2g0917 473 PANTHER MYB PROTEIN-RELATED 9 472 - -
Pvu2g0917 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 76 IPR017930 -
Pvu2g0917 473 PANTHER TRANSCRIPTION FACTOR MYB88 9 472 - -
Pvu2g0917 473 CDD SANT 28 72 IPR001005 -
Pvu2g0917 473 Gene3D - 15 77 - -
Pvu2g0917 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 127 IPR017930 -
Pvu2g0917 473 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Pvu2g0917 473 SMART sant 77 125 IPR001005 -
Pvu2g0917 473 SMART sant 25 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0917 Pvu-Chr2 14657972 14664897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0917 14 323 MYB Transcription Factor Family AT2G02820 63.810 5.39e-139 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu2g0917 Myb_DNA-bind_6 8.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0917 K09422 - gmx:100807667 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0917 2 14657972 14664897 Pvu2g0917 2 14657972 14664897 ECH
Pvu3g0700 3 9942567 9948257 Pvu2g0917 2 14657972 14664897 PCT