Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0907 ATGGGCATGGACTACTACAACATACTCAAAGTCAATCGCAACGCCAGCGACGACGATTTGAAGAAAGCGTACAAGCGCCTCGCCCGCATATGGCACCCCGACAAGAACCCCGACAACAAGAGCGAGGCAGAGGCCAAATTCAAACGAATCTCCGAAGCCTATGATGTCCTCAGCGACCCTCAGAAGCGCCAGATCTACGATCTCTACGGGGAGGAGGCTCTCAAATCCGGCCAGTTTCCGCCGCCGCCGCAGTCCTCCTCCTCCTCCTCCCGCGCCTTTCACCGCCAACATCCCCCCGCCTCCTCCTTCCGCTTCAACCCCCGCGACGCTGACGACATCTACGCTGAGTTCTTCGGCCCGGACGACGTCGGCTCCTCGCGCCGCAACGCCTTCTTCCGAACCTCCAACGGCGGCCCCGCGTTCGGCGCCGCCGCCCCGAGGAAGGCTTCCCCGATCGAGAACGCGCTCCCCTGCAGCTTGGAGGACCTCTACAAGGGCGTCAAGAAGAAGATGAAGATCTCCAGGAACGTCTACGACGCTTTTGGCAAACCTCGAAATGTGGAAGAGATTTTGACCATTGAGATAAAACCTGGTTGGAAGAAAGGAACAAAGATTACCTTCCCAGAGAAGGGTAACCAGGAGCCTGGTGTCATCCCAGCAGATCTAATTTTTGTGATAGATGAGAAACCGCATGCTCTTTATAGAAGGGATGGCAATGATTTGGTGATCAACCAGGAGATAACCCTTCTTGAGGCCCTTACAGGTAAAACGTTGGACCTTACCACCTTGGATGGAAGGAGTCTCGTCTTACCATTGACAGATATTGTCAAACCTGGTGCCGAGATTGTTGTCCCTGATGAAGGAATGCCTATATCAAAAGAGCCTGGGAAGAAGGGAAATTTGAGAGTTAAGCTTGACGTCAAGTATCCTTCAAGGCTAACTCCAGAGCAGAAGTCTGATCTGAGGAGAGTGTTAGGTGGAATCTCATGA 990 0.5364 MGMDYYNILKVNRNASDDDLKKAYKRLARIWHPDKNPDNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSSSRAFHRQHPPASSFRFNPRDADDIYAEFFGPDDVGSSRRNAFFRTSNGGPAFGAAAPRKASPIENALPCSLEDLYKGVKKKMKISRNVYDAFGKPRNVEEILTIEIKPGWKKGTKITFPEKGNQEPGVIPADLIFVIDEKPHALYRRDGNDLVINQEITLLEALTGKTLDLTTLDGRSLVLPLTDIVKPGAEIVVPDEGMPISKEPGKKGNLRVKLDVKYPSRLTPEQKSDLRRVLGGIS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0907 329 MobiDBLite consensus disorder prediction 74 106 - -
Pvu2g0907 329 CDD DnaJ_C 156 313 - -
Pvu2g0907 329 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 319 IPR008971 GO:0006457|GO:0051082
Pvu2g0907 329 Gene3D - 231 311 - -
Pvu2g0907 329 CDD DnaJ 4 59 IPR001623 -
Pvu2g0907 329 Pfam DnaJ C terminal domain 153 310 IPR002939 -
Pvu2g0907 329 SUPERFAMILY HSP40/DnaJ peptide-binding domain 152 231 IPR008971 GO:0006457|GO:0051082
Pvu2g0907 329 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pvu2g0907 329 PANTHER BNAA06G20720D PROTEIN 2 328 - -
Pvu2g0907 329 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pvu2g0907 329 SMART dnaj_3 3 62 IPR001623 -
Pvu2g0907 329 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pvu2g0907 329 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pvu2g0907 329 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pvu2g0907 329 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pvu2g0907 329 Gene3D DnaJ domain 2 130 IPR036869 -
Pvu2g0907 329 Gene3D - 151 229 - -
Pvu2g0907 329 Pfam DnaJ domain 4 67 IPR001623 -
Pvu2g0907 329 SUPERFAMILY Chaperone J-domain 3 84 IPR036869 -
Pvu2g0907 329 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 328 - -
Pvu2g0907 329 MobiDBLite consensus disorder prediction 79 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0907 Pvu-Chr2 13897231 13901359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0907 5 74 C2H2 Transcription Factor Family AT1G74250 36.486 3.11e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0907 K09510 - gmx:100819472 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0907 2 13897231 13901359 Pvu3g0732 3 10624563 10626888 PCT