Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0906 ATGGGAAACTGTAACGCGTGTGCGAAGGCTGATGTGGTGGAAGACAATAGCAAGTCGAGCGACGGCAACCGCGCCCGGAAAAAGGAGGCGAACCACAAAAAGCCGAACCCGTTTTCGGAGGAACCGGGGAGGTTGGCGGCGCCGATCCGTGTTCTGAAGGACGTGATTCCAATGAGCCACAGGACGCGCATAAGCGACACGTACATATTGGGCCGGGAATTGGGCCGGGGGGAGTTCGGCATCACCTACCTCTGCACGGACCGGGAAACCAAGGAGGCGCTGGCCTGCAAATCGATCTCGAAGCGGAAGCTGCGAACCGCCGTGGACATTGAGGACGTCCGGCGCGAGGTGGCTATCATGTCCACGCTTCCGGAGCATCCCAACATCGTGAGGCTCAAGGCTACCTTCGAGGACAACGAGAACGTGCACCTCGTGATGGAGCTCTGCGAGGGAGGAGAACTCTTCGACAGGATCGTCGCCCGTGGGCACTACAGTGAGCGCGCCGCCGCTGCCGTGGCTCGCACCATCGCTGAAGTTGTGAAGATGTGCCATAGCAATGGCGTCATGCATAGAGACCTCAAGCCTGAGAACTTCCTTTTCGCGAATAAGAAGGAAAATTCCGCTCTCAAAGCCATCGATTTTGGCCTCTCGGTGTTCTTCAAACCAGGGGAGAAGTTTGCGGAGATTGTGGGGAGTCCTTACTACATGGCGCCGGAGGTTCTGAAGCGGAATTACGGGCCGGAGGTGGATGTGTGGAGTGCTGGAGTGATCCTTTATATTTTGTTGTGTGGGGTTCCTCCGTTTTGGGCAGAGACTGAGCAAGGTGTGGCGTTGGCGATCTTGAGGGGTGTGATTGACTTCAAGAGGGAGCCTTGGCCGCAGATATCGGAGAGTGCCAAAAGCCTTGTGCGCCGAATGTTGGAGCCCGATCCTAAAAAGCGTTTGACAGCTGAACAGGTTCTTGAGCATCCCTGGCTGCAAAATGCAAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTGAGGTCAAGGCTTAAGCAGTTTTCTGTGATGAATAGATTCAAAAAGAGAGCTCTGCGGGTAATTGCAGAGCATTTATCTGTTGAAGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGATACTGACAAAGATGGCAGAGTAACATTCGAGGAGCTGAAGGCTGGATTGAGGAAAGTTGGTTCACAATTGGCTGAGCCAGAGATAAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAACGGAGTACTTGACTATGGAGAATTTGTAGCTGTTACGATTCACTTGCAAAAAATGGAGAACGATGAGCATTTCCACAAAGCATTCAAGTTTTTTGACAAAGATGGGAGTGGTTATATTGAGTCGGGCGAGTTACAAGAAGCCTTAGCAGATGAGTCAGGAGAAACTGATGCTGATGTATTAAATGATATCATGCGTGAAGTAGACACTGACAAGGATGGTCGCATTAGTTATGAGGAGTTCGTGGCAATGATGAAAACTGGAACTGACTGGAGAAAAGCATCCAGGCAATATTCAAGAGAGAGATTCAAGAGTTTGAGCCTAAACTTAATGAAGGATGGCTCGCTTCAGCTTCATGATGGAATTACTGGTCAAGCTGTGGTGGTTTGA 1653 0.5033 MGNCNACAKADVVEDNSKSSDGNRARKKEANHKKPNPFSEEPGRLAAPIRVLKDVIPMSHRTRISDTYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNIVRLKATFEDNENVHLVMELCEGGELFDRIVARGHYSERAAAAVARTIAEVVKMCHSNGVMHRDLKPENFLFANKKENSALKAIDFGLSVFFKPGEKFAEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISESAKSLVRRMLEPDPKKRLTAEQVLEHPWLQNAKKAPNVPLGDIVRSRLKQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFTLMDTDKDGRVTFEELKAGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQKMENDEHFHKAFKFFDKDGSGYIESGELQEALADESGETDADVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDGITGQAVVV* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0906 550 Pfam EF-hand domain pair 374 433 IPR002048 GO:0005509
Pvu2g0906 550 Pfam EF-hand domain pair 444 507 IPR002048 GO:0005509
Pvu2g0906 550 ProSitePatterns EF-hand calcium-binding domain. 490 502 IPR018247 -
Pvu2g0906 550 CDD STKc_CAMK 68 325 - -
Pvu2g0906 550 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Pvu2g0906 550 SUPERFAMILY EF-hand 354 533 IPR011992 -
Pvu2g0906 550 ProSiteProfiles Protein kinase domain profile. 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0906 550 PANTHER BNAA09G44420D PROTEIN 18 526 - -
Pvu2g0906 550 Gene3D Transferase(Phosphotransferase) domain 1 154 334 - -
Pvu2g0906 550 ProSiteProfiles EF-hand calcium-binding domain profile. 477 512 IPR002048 GO:0005509
Pvu2g0906 550 SMART efh_1 373 401 IPR002048 GO:0005509
Pvu2g0906 550 SMART efh_1 445 473 IPR002048 GO:0005509
Pvu2g0906 550 SMART efh_1 481 509 IPR002048 GO:0005509
Pvu2g0906 550 SMART efh_1 409 437 IPR002048 GO:0005509
Pvu2g0906 550 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
Pvu2g0906 550 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Pvu2g0906 550 Gene3D Phosphorylase Kinase; domain 1 69 153 - -
Pvu2g0906 550 ProSitePatterns EF-hand calcium-binding domain. 418 430 IPR018247 -
Pvu2g0906 550 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Pvu2g0906 550 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Pvu2g0906 550 SUPERFAMILY Protein kinase-like (PK-like) 54 354 IPR011009 -
Pvu2g0906 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pvu2g0906 550 CDD EFh 445 507 IPR002048 GO:0005509
Pvu2g0906 550 SMART serkin_6 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0906 550 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Pvu2g0906 550 Gene3D - 335 510 - -
Pvu2g0906 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 526 - -
Pvu2g0906 550 MobiDBLite consensus disorder prediction 14 39 - -
Pvu2g0906 550 Pfam Protein kinase domain 70 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0906 550 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0906 Pvu-Chr2 13885894 13890809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0906 1 550 EF-hand Containing Proteins AT1G74740 80.762 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu2g0906 Pkinase 6.8e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0906 K13412 - gmx:100809838 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0906 2 13885894 13890809 Pvu3g2005 3 40631819 40635469 PCT