Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0869 ATGGATCTACAAAACATGCAAAATCAAAGCATGCATTTTGTGTTGTCCACTGATGCCAAACCAAGGCTAAAATGGACTCCTGAACTTCACCAACGGTTCATTGAGGCGACAAATCAGCTTGGAGGTGCAGATAAAGCAACTCCAAAGAGTCTTATGCGGGTGATGGGGATTCCAGGACTTACTTTGTATCACCTGAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACAACTAGATACCAGCTCTGACAGCAAACAAGAAGATTACATAGAAACCAAGAGCAGTGATGGCCATTGCAGCAGGGAAATCAGTCTTGGGGCCCAGAATCAAATTACTGAAAACATGGAGATAGCTCAGGCACTCCAAATGCAAATGGAAGTACAAAGGAAGCTTTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTCCGGATTGAAGCTCAAGGGAAGTATTTGCAATCAGTGCTAAAGAAGGCACAGGAAGCACTTGCTGGATACAACTCTGCCCCAGTGGGGATAGAACTCACAAAAGCTGAACTTTCTCAGCTAGTTACCATCATCAACAATGCTTGTCCAAGTTCTCCCACCTCAGAACTAACAGAGACAAGAGGGTTGAGTTTAAGCTGTGGGGATAGGAAAAGAGACAGAGGCACTATGTGTTCACTGGAAAGTTCCTTAACATCTTCTGAAAGCTCTGGGAGAAAGGAAGAGAAACAGTCAATGGAAGAGATAGAGGAGTTCAAAAGCTCCAATAATGCTTCACATGAATTGCCATTGATGGGCATTCACACTGAGAATAAAGCGTCCAACGGAGGCTCAATCAGTGAGGCTAGTGGGAGAAAGAGAAGTGCAGCAACAAAATCTAATGATGGTAGGTGTTTTGTTGAACAACCATGTGGGAAAAGAGGTGGCAACAAGTTGAGGAAACCAGAAATGCTTGACTTAAACAGCCAATGCCAGAGTGACATGGACTCAACAACTTCAAAAACATTAGACTTAAATTGCAGCTTAAACTTTTGGGATCAATGA 1035 0.429 MDLQNMQNQSMHFVLSTDAKPRLKWTPELHQRFIEATNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQQLDTSSDSKQEDYIETKSSDGHCSREISLGAQNQITENMEIAQALQMQMEVQRKLYEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSAPVGIELTKAELSQLVTIINNACPSSPTSELTETRGLSLSCGDRKRDRGTMCSLESSLTSSESSGRKEEKQSMEEIEEFKSSNNASHELPLMGIHTENKASNGGSISEASGRKRSAATKSNDGRCFVEQPCGKRGGNKLRKPEMLDLNSQCQSDMDSTTSKTLDLNCSLNFWDQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0869 344 MobiDBLite consensus disorder prediction 76 97 - -
Pvu2g0869 344 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Pvu2g0869 344 MobiDBLite consensus disorder prediction 268 286 - -
Pvu2g0869 344 MobiDBLite consensus disorder prediction 232 252 - -
Pvu2g0869 344 Gene3D - 19 77 - -
Pvu2g0869 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Pvu2g0869 344 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Pvu2g0869 344 Coils Coil 120 140 - -
Pvu2g0869 344 MobiDBLite consensus disorder prediction 219 291 - -
Pvu2g0869 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 341 IPR044848 GO:0003700
Pvu2g0869 344 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 341 - -
Pvu2g0869 344 MobiDBLite consensus disorder prediction 193 212 - -
Pvu2g0869 344 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Pvu2g0869 344 Pfam MYB-CC type transfactor, LHEQLE motif 117 163 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0869 Pvu-Chr2 13121669 13123872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0869 11 336 G2-like Transcription Factor Family AT1G69580 48.083 3.35e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu2g0869 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0869 - - gmx:100787178 582.022