Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0859 ATGGCTGTTGATTCTGCGATGTCGTCCCCATTGGGTCCACCGGCGTGTGACAAGGACGCGAAGGCGCTGCGGTTCATTGAGGAAATGACCCGAAACGCCGACGCCGTCCAAGAGAGGGTGCTGGCGGAGATTCTCACGCGCAACGCCCACACAGAGTACCTTAAACGCTTCGAACTCGGCGCCGCCGCCGACCGTCAAACCTTCAAGTCTAAGATTCCCGTTATCTCTTACGAGGATGTCCAGCCCGAGATTCAACGCATCGCTAATGGCGACCGCTCCCCTATCTTGTCCGCTCATCCCATCTCCGAATTTCTCACCAGTTCTGGTACTTCAGCTGGAGAAAGAAAATTGATGCCAACAATTAAGGAAGAGTTGGATCGTCGCCAACTTCTATACAGCCTCCTAATGCCAGTTATGAACCTTTATGTGCCGGGTTTAGACAAGGGAAAGGGCCTATACTTTTTATTCGTGAAGTCCGAAACAAGGACACCGGGTGGGTTACTGGCCCGTCCGGTTCTCACAAGCTACTACAAAAGCGACCATTTCAAGACCCGACCTTACGACCCGTATAATGTGTACACAAGTCCAAATGAAGCAATTCTCTGCCCCGACTCATTCCAAAGCATGTACACGCAAATGCTCTGTGGCCTCATTGAACGCAACCACGTCCTCCGCCTTGGCGCCGTCTTTGCCTCCGGCCTCCTTCGCGCCATCCGATTCCTCCAACTCCACTGGCCCCGACTCGTCCATGATATCCGATCTGGAACCCTAACTTCCCAAATCACCGACCCTGCAATTAGGGAATACATGGACAATAATGTGATAAAACCCGACCCGAAATTGGCCCAGTTTTTGACAGAAGAATGCTCCAAGGAGAAGTGGGAAGGGATCATCACAAGAATTTGGCCCAACACAAAATACTTGGACGTCATCGTAACGGGAGCCATGGCCCAATACATTCCCACGCTTAACTATTACAGCGGAGGATTGCCCCTTGCATGCACCATGTACGCTTCCTCGGAGTGCTACTTCGGGTTAAACCTAAATCCAATGTGCAAGCCCTCTAAGGTCTCCTACACCATCATGCCAAACATGGCGTATTTTGAATTCCTTCTCCACGATCCTATTTCTGGCTCTACCAGTTCAAAACTGGTGGATTTGGTCGATGTGGAGGTAGGAAAGGAGTACGAGTTGGTAATCACCACCTATGCGGGACTCTACCGGTATCGTGTGGGGGACATCCTCCGAGTCACCGGATTCCACAACTCGGCGCCGCAATTCCACTTCGTGCGGCGGAAAAACGTGTTGCTGAGCATTGACTCGGACAAAACGGACGAGTCGGAGTTGCAGAATGGGATTGAGAATGCCTCGAGGCTCTTGGCTGAGTTCAATACGAGTGTGGTGGAATACACGAGTTATGCTGACACAACGACGATTCCGGGTCACTATGTTATTTACTGGGAGTTATTGAGCAAGGACTCGGCGAACTCACCGAGTCACGAGGTGTTGAATCGGTGCTGTTTGGAGATGGAGGAGGCGCTGAACTCCGTGTACAGGCAGTGTCGTGTTGCGGATCATTCCATTGGGCCATTGGAAATACGCGTTGTGAAGAATGGAACCTTTGAGGAGCTTATGGATTATGCAATATCAAGAGGTGCTTCAATAAATCAATACAAGGTACCTAGGTGCGTGAATTTCACACCCATAGTGGAGTTATTGGACTCTAGGGTTGTGTCAGTGCATTTTAGCCAAGAATTGCCACATTGGACCCCTGAAAGGAGAAGGTGA 1788 0.5073 MAVDSAMSSPLGPPACDKDAKALRFIEEMTRNADAVQERVLAEILTRNAHTEYLKRFELGAAADRQTFKSKIPVISYEDVQPEIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLIERNHVLRLGAVFASGLLRAIRFLQLHWPRLVHDIRSGTLTSQITDPAIREYMDNNVIKPDPKLAQFLTEECSKEKWEGIITRIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLNPMCKPSKVSYTIMPNMAYFEFLLHDPISGSTSSKLVDLVDVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQNGIENASRLLAEFNTSVVEYTSYADTTTIPGHYVIYWELLSKDSANSPSHEVLNRCCLEMEEALNSVYRQCRVADHSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVNFTPIVELLDSRVVSVHFSQELPHWTPERRR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0859 595 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.2-RELATED 5 595 - -
Pvu2g0859 595 Pfam GH3 auxin-responsive promoter 26 566 IPR004993 -
Pvu2g0859 595 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 5 595 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0859 Pvu-Chr2 12719788 12723533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0859 6 583 EF-hand Containing Proteins AT1G23160 49.231 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0859 K14487 - gmx:100776488 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0859 2 12719788 12723533 Pvu3g2008 3 40691734 40702409 PCT