Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0857 ATGGAAGATCAAATCCACCGCCACGCCGGAAGAATAAACCCCAATTCCCCGGCATGCTTAAAACTCTTCGGCTTCAGCGTGGTCCACGAAGATCTCACCGAGGACGACGAAGCCCAAACAACCATCGCTCTTGAAGACGCGTCTGATTCAACCGCCAAGTCTACGTCACCGGAATCCGGAGGCGCCTCCGGGTTCCCGACCTCCTCCGGAGACCGAAAATACGAGTGTCATTACTGCTGCCGCGAGTTCGCAAACTCGCAAGCTCTCGGGGGACACCAAAACGCGCATAAGAAAGAGCGGCAACAGCTGAAGCGCGCGCAGTTACAGGCCACGCGAAATGCCGCAGTTTCTTTCGTTCGGAATCCTATCGTGTCTTCGTCGTGGGTGTACATGCCACCACGTGCCGCGCCTTCTCCCTTCCATGTATCTGTTTCACACGGATGCGTGTTCCCCTTGGCGAAGAGCGCCGTCATCAGAAACTGTAACGGTAGCGTAGTAACGGGTGCAAGATCTGCAGGTGCAGGGCTGTTGCCCTATGTTGACGGAGTAGGGGATTCGTCGTCTGCATTTTCCACGATGGGCTCCCAAGTACTGGCCCGGACCTACTATGGGAGGGTTGATGGGCCTTCTCTGAGAAAACTCTCTGGAGGAGAGGTGGGACCCAGTTTTGATGACGGCTTCGGCTTGGACTTGCACCTTAGCCTAGCCCCGCCATGA 717 0.5635 MEDQIHRHAGRINPNSPACLKLFGFSVVHEDLTEDDEAQTTIALEDASDSTAKSTSPESGGASGFPTSSGDRKYECHYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIVSSSWVYMPPRAAPSPFHVSVSHGCVFPLAKSAVIRNCNGSVVTGARSAGAGLLPYVDGVGDSSSAFSTMGSQVLARTYYGRVDGPSLRKLSGGEVGPSFDDGFGLDLHLSLAPP* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0857 238 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Pvu2g0857 238 MobiDBLite consensus disorder prediction 45 70 - -
Pvu2g0857 238 SUPERFAMILY beta-beta-alpha zinc fingers 70 101 IPR036236 -
Pvu2g0857 238 MobiDBLite consensus disorder prediction 45 66 - -
Pvu2g0857 238 PANTHER ZINC FINGER PROTEIN GIS3 14 237 - -
Pvu2g0857 238 Gene3D Classic Zinc Finger 62 122 - -
Pvu2g0857 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Pvu2g0857 238 PANTHER ZINC FINGER PROTEIN 5 14 237 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0857 Pvu-Chr2 12660779 12661542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0857 20 237 C2H2 Transcription Factor Family AT1G68360 43.346 5.69e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0857 - - pvu:PHAVU_002G082900g 486.108