Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0850 ATGATGTCGTATCAATCAATGGAGGAGAGAAAGTTTGTGTGCAAGTATTGCAGCAAGAGGTTCCCGTGTGGGAAGTCTCTTGGTGGCCACATCAGGACTCACATGATGAGTGAGAATTCAGCTTTAGGTAATGCAGAGAGGAACATTGCTACTAATGGTATGTTCAAGTTGAATGGAGGGGGAAAGAGGAAGAGGGATTCGGGGTCTGAAGAAAATGGTGGTGGTGCTAGTCGGGGGAACTATAACGTCATTTATGGTCTTAGAGAGAACCCCAAGAAGACCACGAGGTTTGTGCATTCCAATTCCAGTTTGCAGGTTGACAAGTTCTGCAAAGAATGTGGGAAGGGATTTTTTTCATTGAAGGCTCTTTGTGGCCACATGGCTTGTCACTCTGAAAAGGACAAGGGAGCCAACAGGTTTGAGAGCAGTTCTGGCGGGTTTTCTGAGAAGCAGAAATTGGTTATGGACAGTCAGTCTGACACTGAAACTTCTACGCCAAGGAGGTCCAAGAGAATGAGGTTCAAGACCCTTAGCAGTAGCAACAACCAAGCTCAATCTTCTGTTTCGGAGGTTGAGCAGGGTCAAGAAGAGGTGGCCAGGTGTTTGATGATGTTGTCCAAGGATTCTAGCTATAAGGGTCGTTTTGCTTTGTTCACAGAGTCTTCTGATAACAACTCGGTTGTTCTGGAGGCAAAGTCACCTTCTCCAGAAACCAAGGTTACTATGATGAATAGTAATGGTAAGAATTTTATGTCTAGTGCTTATGTGGAGAAGAAGTTGGAGCAGCCCAAGGACTTGAAGTTTAAGTATGCTGAAGTTGGCTATGATTCTGATAATTCAGATTCTGGGTATTTTAGATATGGTCCTAAGGAGGTTGACTCAACTGATTCAAATAACGGGAATTCCAAGAATGAGGCTATGTCTTCGAAAGCGGGGTACTTAACTGGGTTTGAGGATTATGATGTTGAGTCGAGGAAAGTGCTAAGCAGGGGAAGAAGCAGTAGCATTGAATTTAAGAAATTTGTTTTGGAGGATTGGGAGAATGATAGACAAGATGGTGGGGCTGCAAGGAAATTTGATTCAAAGAAATTTAAGAAATCCAACTATGATTCTCTTGGCCAAAATTTAGGTGGGGTTTCTAGCAGGAAGATTGGGAATGGTTTTGCAAATGATAAGGTGAACAAGTACAAGTGCTTAACCAGTGATAGAGACAATGGTTATGATGATTCTGCTTATGAGAGTGATGAAAACAGCACAGACACTGATTCTTATCCAGCTCCAAAGGCGTACCGCAACAGGAACCTCAGTGGACAAAAGGGGAAGAAGAAATTGAAGTCAAAGAAAAGCAAGGCACATGAGTGCCCAATCTGCAACAAAATTTTCAGGTCAGGCCAAGCCTTGGGGGGTCATAAGAGATCCCATTTTATTGGAGGTTCTGAAGAGAACACTCTTGTGATAAGGCCATCTGCTCCTGCTGTTCCTTGCCTCATTGATCTCAATCTACCAGCACCAGTTGATGAATAG 1524 0.4344 MMSYQSMEERKFVCKYCSKRFPCGKSLGGHIRTHMMSENSALGNAERNIATNGMFKLNGGGKRKRDSGSEENGGGASRGNYNVIYGLRENPKKTTRFVHSNSSLQVDKFCKECGKGFFSLKALCGHMACHSEKDKGANRFESSSGGFSEKQKLVMDSQSDTETSTPRRSKRMRFKTLSSSNNQAQSSVSEVEQGQEEVARCLMMLSKDSSYKGRFALFTESSDNNSVVLEAKSPSPETKVTMMNSNGKNFMSSAYVEKKLEQPKDLKFKYAEVGYDSDNSDSGYFRYGPKEVDSTDSNNGNSKNEAMSSKAGYLTGFEDYDVESRKVLSRGRSSSIEFKKFVLEDWENDRQDGGAARKFDSKKFKKSNYDSLGQNLGGVSSRKIGNGFANDKVNKYKCLTSDRDNGYDDSAYESDENSTDTDSYPAPKAYRNRNLSGQKGKKKLKSKKSKAHECPICNKIFRSGQALGGHKRSHFIGGSEENTLVIRPSAPAVPCLIDLNLPAPVDE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0850 507 SUPERFAMILY beta-beta-alpha zinc fingers 8 36 IPR036236 -
Pvu2g0850 507 ProSitePatterns Zinc finger C2H2 type domain signature. 14 34 IPR013087 -
Pvu2g0850 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Pvu2g0850 507 MobiDBLite consensus disorder prediction 435 449 - -
Pvu2g0850 507 MobiDBLite consensus disorder prediction 407 449 - -
Pvu2g0850 507 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 7 507 - -
Pvu2g0850 507 MobiDBLite consensus disorder prediction 175 191 - -
Pvu2g0850 507 MobiDBLite consensus disorder prediction 292 307 - -
Pvu2g0850 507 MobiDBLite consensus disorder prediction 288 307 - -
Pvu2g0850 507 Pfam C2H2-type zinc finger 451 474 - -
Pvu2g0850 507 Pfam C2H2-type zinc finger 110 132 - -
Pvu2g0850 507 Pfam C2H2-type zinc finger 12 35 - -
Pvu2g0850 507 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Pvu2g0850 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 452 474 IPR013087 -
Pvu2g0850 507 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 7 507 - -
Pvu2g0850 507 MobiDBLite consensus disorder prediction 135 191 - -
Pvu2g0850 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 12 39 IPR013087 -
Pvu2g0850 507 ProSitePatterns Zinc finger C2H2 type domain signature. 454 474 IPR013087 -
Pvu2g0850 507 MobiDBLite consensus disorder prediction 141 162 - -
Pvu2g0850 507 MobiDBLite consensus disorder prediction 53 81 - -
Pvu2g0850 507 SUPERFAMILY beta-beta-alpha zinc fingers 109 474 IPR036236 -
Pvu2g0850 507 Gene3D Classic Zinc Finger 2 135 - -
Pvu2g0850 507 SMART c2h2final6 108 130 IPR013087 -
Pvu2g0850 507 SMART c2h2final6 452 474 IPR013087 -
Pvu2g0850 507 SMART c2h2final6 12 34 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0850 Pvu-Chr2 12483636 12485884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0850 5 507 C2H2 Transcription Factor Family AT1G26610 39.889 3.03e-92 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu2g0850 zf-C2H2_6 1e-10 CL0361