Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0844 ATGGAAGACAAGGACAGAGCAAGCTCCGATCCCGCTGCGGTTGAGTTCGCCGGCGACACAAGTTGGACATTCGCCGCCGATGGGTCCGACGCCGCTTACTTGTTCTCCGGAGACACAGAGCGAAGCATACTCAGGGAATTCGGGTGGAACCTCGAGACGGACCAGCCGAACCGGATCGGCACCGACGACAGATTGTGGATGCCGGTTCAATCCTCTCTGACCGGTTCGATTGAACCTGTCGCTGCTGCATCGTCGCGGTCGAATAACCAGTCGGTTTCGTCGAGCTCCAGCGAGGATCAGCCGGAGAAATCCACCGTCTCTGACGAGAAACCGCCTGAGATACCGAGTAAAGGTAAAAAGAAGGGGCAAAAGCGAATAAGGCAGCCACGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGCCCATTCCCTAGGAGCTACTACCGCTGCACAAACAGCAAATGCACGGTGAAGAAGAGGGTTGAACGCTCTTCCGAGGACCCAACGATTGTGATTACAACATATGAAGGCCAGCACTGCCATCATACCGTTGGATTTCCTCGAGGGGGAATCATCAGTCACGAGGCTGCTGCCTTTGCCGGCCAGTTGGCTCCTACAATTTCACAGTTTTATTATCCAATTCATTCACCAAGAGAGACTAATAATATAAATACTCTCAGCTCCATTTCTCAGCCATGCCAAGCACAGGATGATGCATCTGGAGGATCCACCGCAATAATGCCAGCTGATGCATCGTCGCTGCCGCCTCCCACGGATGAAGGGTTGCTTGGAGATATTGTACCTCCGGGAATGCGTATCAGATGA 879 0.5222 MEDKDRASSDPAAVEFAGDTSWTFAADGSDAAYLFSGDTERSILREFGWNLETDQPNRIGTDDRLWMPVQSSLTGSIEPVAAASSRSNNQSVSSSSSEDQPEKSTVSDEKPPEIPSKGKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAAFAGQLAPTISQFYYPIHSPRETNNINTLSSISQPCQAQDDASGGSTAIMPADASSLPPPTDEGLLGDIVPPGMRIR* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0844 292 Gene3D WRKY domain 129 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0844 292 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 13 216 - -
Pvu2g0844 292 MobiDBLite consensus disorder prediction 102 119 - -
Pvu2g0844 292 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0844 292 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 216 IPR044810 GO:0003700
Pvu2g0844 292 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0844 292 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0844 292 MobiDBLite consensus disorder prediction 79 130 - -
Pvu2g0844 292 SUPERFAMILY WRKY DNA-binding domain 134 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0844 292 MobiDBLite consensus disorder prediction 250 292 - -
Pvu2g0844 292 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0844 Pvu-Chr2 12429691 12436481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0844 9 290 WRKY Transcription Factor Family AT1G69310 48.397 2.10e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g0844 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0844 - - gmx:100170676 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1206 3 29019242 29021426 Pvu2g0844 2 12429691 12436481 PCT