Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0819 ATGCCTTCGGAGACTGACGTCACCATCTCCTCTTTCCGGCTCCGCTGGGACGTCTTTCTCAGCTTCCGGGCCACCGACACGGGTCACGCCTTCACCATGGGCCTCTACCACGCGCTCCACAGCCGCGGCGTTCGCGTCTTCCGAAACGACGATGGGTTGGAGCGCGACGATGAGATCCAGAAGAAGCTTCTAGAAGCCGTGGAAGACTCTGCCGCCGCCGTCATCGTTATCTCTCCCGATTACGCATCCTCGCACTGGTGCCTGGAAGAGCTCTCGAAGATTTGCGAGAGTGGGAGGCTGATCCTCCCGGTTTTCTACTGGGTGGATCCTTCGCACGTGCGAAAGCAAGAGGGTCCCTTCCAGGAGTGCTTCGTGCGGCATGCAGAGAAGTTTCCGAAAGAGAGGGTTGAGCAGTGGAGGGATGCGATGAAGAAAGTGGGTGGACTCGCTGGTTTTGTTTTGGATGAGAAAAGGGACAAGAGTGATAAACTCATTCAGATTTTGGTGCAAACGCTTATGAAGCAGCTGAGGAACACACCACTGACAGTGGCTCCATACACAGTAGGTCTGGATGATAGAGTTGAAGTGTTGAAAAAAGTTTTAGAGTTAAAATCCAACGACGTAAGGATTTTGGGGTTGTATGGAATGGGTGGAGTTGGTAAGACAACTCTAGCCAAGAGCCTCTTCAATAACCTTGTTGTTCATAATTTTGAGCGACGCAGTTTCATTCCAAATGTTAGATCACAAGTCTCCAAACACAATGGTTTGGTTTCTCTTCAAAACAAAATCCGTGGTGATCTTAGTGGAAGAAAAGAGGATCTAATCAACGATATTAGCGATGGCATTTCTGCTATAAGAGAATTAGTGCAAGAGAAACGAGTTTTGTTGATCCTAGATGATGTTGATGATGTGGAGCAGCTTAAGTTTTTGATGGGTAAGAGGGAATGGTTTTACAAGGGAAGCCGTGTTGTGATAACCACAAGGGATAAAGAAATTTTGACAGAGAGTTATGTTGATGTGCATTATGAGGTGAAGGAATTGGAATTCTCTCAAGGAATGGAACTGTTTTGCTTCCATGCAATCAGAAGAAAGGAACCTGCAGAGGGATTTTTGGATCTTTCAAAGCAAATTGTGGAGAAGACAGGAGGGTTGCCTTTGGCTTTGGAAGTTTTTGGCTCTTTTCTGTTTGACAAGAGGAGCACGAGGGAATGGAAAGATGCTTTGGAGAAGCTGAAGCAGATTCGTCCTGCATGTCTTCAAGATGTACTGAAAATAAGTTTTGATGCGTTGGATGAAGAAGAACAGTGTATATTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGAAATGAAGAGAGATGATGTGGTTGACATATTGAATGGATGTGATTTTAGAGGAGAGATAGCAGTAGCTGTGCTCACTGCAAGATGTCTAATTAAGATTAGAGATGGAAAATTGTGGATGCATGATCAACTTAGAGACATGGGAAGGCAAATTGTTCACAGTGAAAGCCTTACAGATCCTGGTCTTCGAAGCAGGCTCTGGGATCGTCATGAAATCTTGACTGTCTTGAAGAATATGAAGGGAACGAGAAATGTTCAAGGAATTGTCCTAGATTGTGTGAAGAGAAGAATGTCCACTCCCAGAAATCGATCAGCAGACGAAATTACTTGGGAAAATTTTCGACTTAAGCCCAGTTGCAAATCTGCATTAGAATATATTAAAGAGAGGTATAAAAAGTATGTAGAGGATAGAAAAGAGAAAGCAAAAGAGGTTATCCTTCAGCCCAAGCACTTTCAACCAATGGTTTCCTTAAGAATGCTTCAGATTAATTATTCCAGATTGGAAGGACAATTTAGATGTCTTCCTCCAAGACTCAAGTGGTTACAATGGAAACAGTGTCCATTAAGGTATATGCCTTCAAGCTATAATCCTATGGAACTTGCAGTCATGGATCTTTCTGAAAGTCAGATTGAAACCTTGTGGAAGGGACGCAGTAACAAGGTCGCTGAGCACTTGATGGTTTTAAACCTCTCCAATTGCCACCATTTGATAGCAACTCCTGATTTAACTGGCTATGTATCTCTCAAAAAACTAATTTTGGAACAGTGTTCTCATTTAACTAGGATTCATGAAACATTAGGGAATCTAAATTCCTTAGTTCACCTGAACTTGCACCTCTGCCATAACCTTATCCAACTACCTGGTGATGTCACTGGGCTGAAACATCTCGAGGACCTTATTCTTTCCGACTGCAGGAAATTGAAAGCATTACCAAGAGACTTGAGCTGCATGGTTTCATTAAGACGGCTACTTCTTGATAGAACTTCTATATCTGAGCTTCCTGAGTCCATCCTCCATCTCACAAAACTTGAAAAGCTGAGTGCAAATGGATGCCACTTTCTGAAGAGGTTACCTACCTGCACTGGGAAACTCTGCTCCCTGCAGGAATTGTCACTCGACCATACAGCATTGGAGGAATTGCCAGATTCAGTTGGTTCTTTGGAAAAACTTGAGATGCTTAGTTTGATGGGGTGTAAGTCACTCTCAGTGATTCCTAACTCTGCTGGGAAACTAATTTCATTGACTCAATTGTTTTTGAACGGCAGTGGAATCAAAGAATTGCCAGCTTCTATTGGTTCTTTGTCATATTTAAGGAAGCTGAATGTTGGAGACTGTACTTCTCTTGACAACTTTCCTGTCTCAATGGAAGCATTAGTTTCAATTGTTGAACTTAATTTGAATGGCACAAAAGTTACCAATTTTCCAGATGAAATATTTGTGGGCATGAAAATGCTAGAAAAGCTGGAGATGAGAAAATTTCAGCATCTGAGGTTTCTACCAGTATCATTTGGCTGCCTGACAGCTCTTACCAGTTTGGACATGCATGAGGCAAACATTACTGAATTGCCAGAATCAATAGGGATGTTGGAAAATCTTATTCGGTTGAGGTTAGACTGGTGCAAACAGCTCCAAAGACTTCCAGACTCCGTTGGAAATTTGAAGTCTTTGAGATGCTTAATGATGAAGGAAACAGCAGTTACACGACTACCAGATAGCTTTGGGATGCTTAGAAACCTGGAAGAACTAAACATGGAAAGAAGGCTCTATCTTAATGGGGCTGGAAACAACGTGTCCACCGGGATGATAATACAAGGAGAACCTAATTCAGAGGCAATATTAACTTCTTTTTGCAGTCTAACCTTGCTGGAAAAGCTAAATGTTCATGGATGGGGAATATATGGAAAAATTCCGGATGAGTTTGAAAAGCTATCATCACTAGAAACTTTAAGCTTAGGTCACAACAATATTTGCAGTCTTCCAGCCAGCATGATGGAACTCTCCTATCTGAAAAAGCTTTTATTGTCAGATTGCAGGGAGCTCATGTTTCTGCCTCCTCTTCCCTCTAGCCTAGAAGTGCTTAATCTTGAAAACTGTGCAGCATTGCAGTACATAGAGGATATTTCAAACTTGGAGCGCTTGGAGGAGTTCAACCTAACAAATTGTGAAAAGGTGGTGGATGTCCCAGGTCTTGAACATTTGAAGTCCTTAAGAAGGTTGTACATGAGTGGTTGCATTGGATGCTCCCTTGCCGTAAAAAGAAGATTTTCCAAGGTTCTACTTAAAAAGTTAGAGATTTTGATTATGCCTGGAAGCAGGGTCCCGGATTGGTTTACAGAAGAACCAGTTGTGTTTTCCAAGAGAAGGAACAGTGAGCTTAAAGGTATTATTTGTTTTGGTGTTCTCTCTTTCAAGAATGTACCTGAAAATCAAAGGGAAGGACTACAGTTAGAGGATGTTCAAGGAAAAATCCTTAATTTGACGAGTGAAGTATTTAGAACAACGTTTCGGCTGCTAGGAGCACCTAGGAGGAATGAAGAGCACATATTTTTGCGCAGATTTGGAGGCAGGACACCATTATTGTTTGAGTTAAAAGATAGGTATAGCTTGCATTTGCAAAGGCGAAACCCTCCTCGTATTGAGGGGATGGAGGTGAATAACTGCAGAATTCTTTTAGTTTTTTGTGGTGATGATGATTATGAAGGAGATGAAGAATCACTAGATGAAACTCAGTACTCTGTTTCACAAAAATTAGCCAAGTTCTTCAACTTTGCTGATGTGTGA 4125 0.4213 MPSETDVTISSFRLRWDVFLSFRATDTGHAFTMGLYHALHSRGVRVFRNDDGLERDDEIQKKLLEAVEDSAAAVIVISPDYASSHWCLEELSKICESGRLILPVFYWVDPSHVRKQEGPFQECFVRHAEKFPKERVEQWRDAMKKVGGLAGFVLDEKRDKSDKLIQILVQTLMKQLRNTPLTVAPYTVGLDDRVEVLKKVLELKSNDVRILGLYGMGGVGKTTLAKSLFNNLVVHNFERRSFIPNVRSQVSKHNGLVSLQNKIRGDLSGRKEDLINDISDGISAIRELVQEKRVLLILDDVDDVEQLKFLMGKREWFYKGSRVVITTRDKEILTESYVDVHYEVKELEFSQGMELFCFHAIRRKEPAEGFLDLSKQIVEKTGGLPLALEVFGSFLFDKRSTREWKDALEKLKQIRPACLQDVLKISFDALDEEEQCIFLDIACLFVQMEMKRDDVVDILNGCDFRGEIAVAVLTARCLIKIRDGKLWMHDQLRDMGRQIVHSESLTDPGLRSRLWDRHEILTVLKNMKGTRNVQGIVLDCVKRRMSTPRNRSADEITWENFRLKPSCKSALEYIKERYKKYVEDRKEKAKEVILQPKHFQPMVSLRMLQINYSRLEGQFRCLPPRLKWLQWKQCPLRYMPSSYNPMELAVMDLSESQIETLWKGRSNKVAEHLMVLNLSNCHHLIATPDLTGYVSLKKLILEQCSHLTRIHETLGNLNSLVHLNLHLCHNLIQLPGDVTGLKHLEDLILSDCRKLKALPRDLSCMVSLRRLLLDRTSISELPESILHLTKLEKLSANGCHFLKRLPTCTGKLCSLQELSLDHTALEELPDSVGSLEKLEMLSLMGCKSLSVIPNSAGKLISLTQLFLNGSGIKELPASIGSLSYLRKLNVGDCTSLDNFPVSMEALVSIVELNLNGTKVTNFPDEIFVGMKMLEKLEMRKFQHLRFLPVSFGCLTALTSLDMHEANITELPESIGMLENLIRLRLDWCKQLQRLPDSVGNLKSLRCLMMKETAVTRLPDSFGMLRNLEELNMERRLYLNGAGNNVSTGMIIQGEPNSEAILTSFCSLTLLEKLNVHGWGIYGKIPDEFEKLSSLETLSLGHNNICSLPASMMELSYLKKLLLSDCRELMFLPPLPSSLEVLNLENCAALQYIEDISNLERLEEFNLTNCEKVVDVPGLEHLKSLRRLYMSGCIGCSLAVKRRFSKVLLKKLEILIMPGSRVPDWFTEEPVVFSKRRNSELKGIICFGVLSFKNVPENQREGLQLEDVQGKILNLTSEVFRTTFRLLGAPRRNEEHIFLRRFGGRTPLLFELKDRYSLHLQRRNPPRIEGMEVNNCRILLVFCGDDDYEGDEESLDETQYSVSQKLAKFFNFADV* 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0819 1374 ProSiteProfiles TIR domain profile. 14 176 IPR000157 GO:0007165
Pvu2g0819 1374 PANTHER TMV RESISTANCE PROTEIN N-LIKE 13 1330 - -
Pvu2g0819 1374 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 152 IPR035897 -
Pvu2g0819 1374 Gene3D - 347 431 IPR042197 -
Pvu2g0819 1374 Gene3D Ribonuclease Inhibitor 546 906 IPR032675 -
Pvu2g0819 1374 ProSiteProfiles Leucine-rich repeat profile. 1093 1114 IPR001611 GO:0005515
Pvu2g0819 1374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 441 IPR027417 -
Pvu2g0819 1374 SUPERFAMILY L domain-like 488 939 - -
Pvu2g0819 1374 CDD AAA 188 329 - -
Pvu2g0819 1374 SUPERFAMILY RNI-like 841 1205 - -
Pvu2g0819 1374 Pfam NB-ARC domain 194 414 IPR002182 GO:0043531
Pvu2g0819 1374 Gene3D Ribonuclease Inhibitor 1137 1214 IPR032675 -
Pvu2g0819 1374 Gene3D Ribonuclease Inhibitor 907 1136 IPR032675 -
Pvu2g0819 1374 PRINTS Disease resistance protein signature 210 225 - -
Pvu2g0819 1374 PRINTS Disease resistance protein signature 288 302 - -
Pvu2g0819 1374 PRINTS Disease resistance protein signature 381 395 - -
Pvu2g0819 1374 PRINTS Disease resistance protein signature 833 849 - -
Pvu2g0819 1374 Pfam TIR domain 16 179 IPR000157 GO:0007165
Pvu2g0819 1374 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1330 IPR044974 GO:0006952
Pvu2g0819 1374 SMART LRR_typ_2 859 882 IPR003591 -
Pvu2g0819 1374 SMART LRR_typ_2 1091 1114 IPR003591 -
Pvu2g0819 1374 SMART LRR_typ_2 1001 1023 IPR003591 -
Pvu2g0819 1374 SMART LRR_typ_2 765 788 IPR003591 -
Pvu2g0819 1374 SMART LRR_typ_2 954 977 IPR003591 -
Pvu2g0819 1374 SMART LRR_typ_2 906 929 IPR003591 -
Pvu2g0819 1374 SMART LRR_typ_2 812 835 IPR003591 -
Pvu2g0819 1374 Gene3D - 13 172 IPR035897 -
Pvu2g0819 1374 Gene3D - 173 340 IPR027417 -
Pvu2g0819 1374 SMART till_3 15 149 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0819 Pvu-Chr2 11854079 11861429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0819 16 912 WRKY Transcription Factor Family AT4G12020 28.087 2.07e-76 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0819 - - gmx:100784137 2205.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0819 2 11854079 11861429 Pvu2g0819 2 11854079 11861429 ECH
Pvu2g0819 2 11854079 11861429 Pvu3g0751 3 10994694 11000957 PCT
Pvu3g0750 3 10944427 10947975 Pvu2g0819 2 11854079 11861429 PCT