Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu2g0815 | ATGCCGTCTCACGCGGATCTGGACCGGCAGATCGAGCACCTCATGGAGTGCAAGCCTCTGCCGGAGGCGGAGGTCAAAGCGCTTTGCGATCAGGCCAGGGCAATTCTCGTCGAAGAGTGGAACGTTCAACCGGTGAAGTGTCCCGTCACCGTCTGCGGCGACATTCACGGCCAGTTTTACGATCTCATCGAGCTTTTTCGGATAGGAGGAAACGCTCCCGATACCAACTACCTTTTTATGGGCGATTATGTAGATCGTGGCTACTATTCAGTGGAGACTGTTACACTTTTGGTGGCCTTGAAAGTTCGTTATAGAGATAGAATTACAATCCTTAGGGGAAATCATGAGAGTCGTCAAATCACTCAAGTGTATGGCTTCTACGATGAATGTTTGAGAAAATATGGAAATGCTAATGTCTGGAAATTCTTTACCGACCTGTTTGATTATTTGCCTTTGACTGCCCTTATTGAGAGTCAGATTTTCTGCTTGCATGGAGGTCTCTCACCATCTTTGGATACACTGGATAATATCCGGGCGTTGGATCGCATACAGGAGGTTCCACACGAAGGACCAATGTGTGACCTATTGTGGTCTGATCCAGATGATCGCTGTGGTTGGGGAATATCTCCACGTGGTGCAGGATATACATTTGGACAGGACATAGCTTCTCAGTTCAATCATACCAATGGTCTATCCCTGATATCTAGAGCTCACCAGCTAGTCATGGAAGGATACAATTGGTGCCAGGACAAGAATGTGGTGACTGTTTTTAGTGCACCTAATTATTGTTACCGATGTGGGAACATGGCTGCCATACTGGAAATTGGAGAGAATATGGATCAGAATTTTCTGCAGTTTGATCCAGCTCCCAGACAAATTGAGCCTGACACTACACGAAAGACTCCAGATTATTTTTTGTAA | 921 | 0.4615 | MPSHADLDRQIEHLMECKPLPEAEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL* | 307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu2g0815 | 306 | SUPERFAMILY | Metallo-dependent phosphatases | 6 | 293 | IPR029052 | - | |
| Pvu2g0815 | 306 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE | 1 | 306 | - | - | |
| Pvu2g0815 | 306 | Pfam | Calcineurin-like phosphoesterase | 48 | 239 | IPR004843 | GO:0016787 | |
| Pvu2g0815 | 306 | CDD | MPP_PP2A_PP4_PP6 | 6 | 290 | - | - | |
| Pvu2g0815 | 306 | SMART | pp2a_7 | 20 | 290 | IPR006186 | GO:0016787 | |
| Pvu2g0815 | 306 | Gene3D | - | 2 | 306 | IPR029052 | - | |
| Pvu2g0815 | 306 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED | 1 | 306 | - | - | |
| Pvu2g0815 | 306 | PRINTS | Serine/threonine phosphatase family signature | 48 | 75 | IPR006186 | GO:0016787 | |
| Pvu2g0815 | 306 | PRINTS | Serine/threonine phosphatase family signature | 77 | 104 | IPR006186 | GO:0016787 | |
| Pvu2g0815 | 306 | PRINTS | Serine/threonine phosphatase family signature | 110 | 134 | IPR006186 | GO:0016787 | |
| Pvu2g0815 | 306 | PRINTS | Serine/threonine phosphatase family signature | 145 | 171 | IPR006186 | GO:0016787 | |
| Pvu2g0815 | 306 | PRINTS | Serine/threonine phosphatase family signature | 174 | 201 | IPR006186 | GO:0016787 | |
| Pvu2g0815 | 306 | PRINTS | Serine/threonine phosphatase family signature | 230 | 250 | IPR006186 | GO:0016787 | |
| Pvu2g0815 | 306 | PRINTS | Serine/threonine phosphatase family signature | 252 | 268 | IPR006186 | GO:0016787 | |
| Pvu2g0815 | 306 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 111 | 116 | IPR006186 | GO:0016787 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu2g0815 | Pvu-Chr2 | 11786707 | 11791073 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu2g0815 | 49 | 225 | Calmodulin-binding Proteins | AT5G63870 | 36.449 | 2.40e-29 | 112 |
Event-related genes