LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g0809	ATGTTGAAGACGAAAGCATTCCAAGGCGCCGACGTGTTCATGTCGCGAAACCTCGTGCCGCCGGAAGTCTTCGACGCGCTGCACGATGCGGTTAAAGATAACGGCGCTCAGCTCCACCTCTGCTGCGACCCCTCCCGTAACGGTCTCAACGATTACCACATCATTGCTTCCAGAAAACACGAAAAGTTCGATGATCTCAAATCCAAGGGCTGCAAGTTGCTCGGTCCTAGATGTGTTCTTTCGTGTGCCAAAGGTGGAAGGTCTCTGCCTAAACAAGGCTTCACTTGTTGCCTTGCCATGGACGGGGTCAAAATACTTGCATCTGGCTTTGATATGGAAGAGAAGGTTAAGATAGAAGAGTTAGTGGCTGAAATGGGGGGAGTGCTACACACTAAGACATCGTTGGATTTGAACTTTGTCATTGTGAAAAATGTTTTAGCTGCAAAGTACAAG	453	0.4857	MLKTKAFQGADVFMSRNLVPPEVFDALHDAVKDNGAQLHLCCDPSRNGLNDYHIIASRKHEKFDDLKSKGCKLLGPRCVLSCAKGGRSLPKQGFTCCLAMDGVKILASGFDMEEKVKIEELVAEMGGVLHTKTSLDLNFVIVKNVLAAKYK	151

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g0809	151	CDD	BRCT	103	150	-	-
	Pvu2g0809	151	Gene3D	BRCT domain	97	151	IPR036420	-
	Pvu2g0809	151	PANTHER	DNA REPLICATION REGULATOR DPB11-RELATED	7	150	-	-
	Pvu2g0809	151	Gene3D	BRCT domain	32	94	IPR036420	-
	Pvu2g0809	151	SUPERFAMILY	BRCT domain	58	150	IPR036420	-
	Pvu2g0809	151	Pfam	twin BRCT domain	103	151	IPR001357	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g0809	1	151	Core DNA Replication Machinery Family	AT1G77320	70.199	5.01e-72	231

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g0809	K10728		-	pvu:PHAVU_002G0782000	310.071

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