Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0808 TGGGCTTTGAATGAATTGAAGAAACCAATAGTCACGTATGAATGGTTAAAGCAATGCTCGGAGGAGCATCGTGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCTGGGTTAAAGATTTGTGTTACTGGAATTCCATCAGATGTTCGTAAAGAGATGGAGAAGCTTATTTTACAAAATGGTGGAAAATACTCCGCGGAATTGACAAAGAATTGCACACATTTGATTTCTGAGGCTCCTGAAGGTGACAAGTATAAGGTAGCAAAACGATGGGGCCACATTCATATTGTGATAAGTAAATGGTTTGCTCAATCAATTGCTCGAAGAGCATGTCTGAATGAGGAGTTCTTCCCTGTTCAGCATGGATCTGTATCTTCACATAAAGTAAGCAGGGACTTACCAATGCAACACAGCCAAGAAAAGGATATTGGGAAATTGCAATCTGCGGCATCCTCAGGTGCTACAGATTCAAATGTGCAAGTTTCTTGTGCTGAGTTTATGGAAAGAGATCAAGAAGCTATGCCATCAGAATATATGTCCTCGGTTTCACAAACTCGTAGATTTGCTAAGGAGGCAGATGCTGAACTTCCATTGCAGGCCAGTGGTGACTTGAACTTTGACGGTGTTGTTGCTGATTATTCTGAATCTGATGATAATGACTTGTACTTATCAGAGTGCAGAATATTTCTAGTTGGTTTTGAAGCTCTAGAAATGCGGAAACTAATTAATATTGTGCATAAAGGTGGAGGCTCCCGGTATTTGTCTTTTAATGACAAATTGACACACATAGTAGTTGGGAATCCTACTGAAATGGAAAAGAAGGATGTGAGGAGTCTTGCTGCTTTAGGTGTAATTTATGTTGTTAAAACCACATGGCTTGAAGATTGCGACCATAAAAAGATAGAAGTCCCTGTTCTTAGGAGACACATTGCATATGATCTACTTCATCCAAAAGGAAGCACACCTATGGATCACAGTAAAAGCTCCAGTTGTCATCAAAGCTCGCATCAGGTGGACTTCAAAATTGTGCAGCCAGAATCTTTGGAGAAAAGAAAAGAAGAGATACAAGATATGGATATAAATGGTCACTCATTCTGTAAAGCAAATTGTAGAACTATGTTGCAAAATCAACTTCCTGATAGTAAATTGAGCACACAAAGGATGAGCCAGCCTGACTTCAGTGTTTCATATGAAAAATCTGCAAATGTTTTCAGAGGGAAATTATTTTGTTTCTCAAATTTGTTTCCTGAAGAAAAGAGAGGTGAGATTGTTCAATGGATAAGTCAAGGTGGAGGAGAGGTAATGAGTGGGAAAACAAAACAGATTGTCCACTACACAGTTGAGTGTCATGGTGTAACACCCATGTTGACTGATGATTCCACGAGTTTGTACATTTCCAGTCACTGGATACGATCTTGTTTGGAGGCTGGATCCTTGCTGGATGTTGACACCCACATCCTTTATTCTCCACTTCCCTGCCACGTTCCCTTGCCTGGATTTGAAAGATTCCGGTTTTGTGTTTCACAGTATGAGGAGAAAGACAGGAATCTGCTAAGAAACTTGTGTTTTGTTCTAGGAGCTAAATTTGGGGAGAAGTTGACTAAGAAGGTTACGCATTTGTTGTGTAAATTCACCAATGGACCCAAGTATGATGGTGCTCTTAAATGGGGGATTCAATCAGTTTCATCTGAATGGATATTTGAATGCATCAAACAGAATGGAGTAGTTGCCACTGATCGATTTTTACCAAAAGAAGTAACAGCTCAAGATCGAGAGGCAGGAATTTGCACTGGGAGTCAATTTCCTACCCAGGCTGCTCAAATGATAAGTGACATGCCCTCGCAGTTGTCAAGTCAATCACAAATTTTGAGAGGCATCAGAAATAAAAATGTGGGTTGTGGAGTTGATAATCATGAGGCCAATTTCAAGAAACCAAGTGTTTATAGCAAAAAGGCAAGACTTGTGGAAGAACCTTGCCTGTCTAATACGATGACTTCGGCATCAAATTCAGGTATTCATGCCTATGAAAAGAATTTTTCTGAAGACAATATGATAATTGATGCTGGGGAGGTGTGCCTTACTGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGCAGACTAGTAAGATGCATGGTCAGAGGTCCCCAGCACAGACAGGGTGTCAGAGAGGTATTTACCCATCTGATCTTTCAGTCCTTGGTGAAGATAATTCCAATCCTCATACCGTCTTTGGGTTATCTAAACACTGGTCAAACAGTGGCAGAAAAGATGATAATGGGGAGGTTTCTCAAGACAGACGAGCAGGAATATACGATGGATTTAGTGAAACACAGACAGAATCTCAGGTTGTTAGTTATGAAGAAGATTTATCAGGAAGGCAAAGGCTTATAGATATAATCCGAACTCGAAGTGGCACGCAGTGA 2433 0.4048 WALNELKKPIVTYEWLKQCSEEHRVVPQESYKVLPFSGLKICVTGIPSDVRKEMEKLILQNGGKYSAELTKNCTHLISEAPEGDKYKVAKRWGHIHIVISKWFAQSIARRACLNEEFFPVQHGSVSSHKVSRDLPMQHSQEKDIGKLQSAASSGATDSNVQVSCAEFMERDQEAMPSEYMSSVSQTRRFAKEADAELPLQASGDLNFDGVVADYSESDDNDLYLSECRIFLVGFEALEMRKLINIVHKGGGSRYLSFNDKLTHIVVGNPTEMEKKDVRSLAALGVIYVVKTTWLEDCDHKKIEVPVLRRHIAYDLLHPKGSTPMDHSKSSSCHQSSHQVDFKIVQPESLEKRKEEIQDMDINGHSFCKANCRTMLQNQLPDSKLSTQRMSQPDFSVSYEKSANVFRGKLFCFSNLFPEEKRGEIVQWISQGGGEVMSGKTKQIVHYTVECHGVTPMLTDDSTSLYISSHWIRSCLEAGSLLDVDTHILYSPLPCHVPLPGFERFRFCVSQYEEKDRNLLRNLCFVLGAKFGEKLTKKVTHLLCKFTNGPKYDGALKWGIQSVSSEWIFECIKQNGVVATDRFLPKEVTAQDREAGICTGSQFPTQAAQMISDMPSQLSSQSQILRGIRNKNVGCGVDNHEANFKKPSVYSKKARLVEEPCLSNTMTSASNSGIHAYEKNFSEDNMIIDAGEVCLTVPDVAAAIEDLLEQTSKMHGQRSPAQTGCQRGIYPSDLSVLGEDNSNPHTVFGLSKHWSNSGRKDDNGEVSQDRRAGIYDGFSETQTESQVVSYEEDLSGRQRLIDIIRTRSGTQ* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0808 810 Gene3D BRCT domain 210 307 IPR036420 -
Pvu2g0808 810 MobiDBLite consensus disorder prediction 136 157 - -
Pvu2g0808 810 Pfam BRCA1 C Terminus (BRCT) domain 221 297 IPR001357 -
Pvu2g0808 810 SUPERFAMILY BRCT domain 403 490 IPR036420 -
Pvu2g0808 810 MobiDBLite consensus disorder prediction 142 157 - -
Pvu2g0808 810 Pfam twin BRCT domain 39 102 IPR001357 -
Pvu2g0808 810 Pfam twin BRCT domain 505 566 IPR001357 -
Pvu2g0808 810 SUPERFAMILY BRCT domain 467 585 IPR036420 -
Pvu2g0808 810 ProSiteProfiles BRCT domain profile. 501 584 IPR001357 -
Pvu2g0808 810 Gene3D BRCT domain 33 121 IPR036420 -
Pvu2g0808 810 Gene3D BRCT domain 495 589 IPR036420 -
Pvu2g0808 810 Gene3D BRCT domain 397 494 IPR036420 -
Pvu2g0808 810 SUPERFAMILY BRCT domain 6 120 IPR036420 -
Pvu2g0808 810 ProSiteProfiles BRCT domain profile. 1 33 IPR001357 -
Pvu2g0808 810 CDD BRCT_TopBP1_rpt2_like 499 574 - -
Pvu2g0808 810 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 1 797 - -
Pvu2g0808 810 ProSiteProfiles BRCT domain profile. 219 297 IPR001357 -
Pvu2g0808 810 ProSiteProfiles BRCT domain profile. 31 120 IPR001357 -
Pvu2g0808 810 SMART BRCT_7 221 301 IPR001357 -
Pvu2g0808 810 SMART BRCT_7 498 574 IPR001357 -
Pvu2g0808 810 SMART BRCT_7 33 110 IPR001357 -
Pvu2g0808 810 SMART BRCT_7 402 478 IPR001357 -
Pvu2g0808 810 SUPERFAMILY BRCT domain 219 304 IPR036420 -
Pvu2g0808 810 Pfam BRCT domain, a BRCA1 C-terminus domain 402 485 IPR001357 -
Pvu2g0808 810 CDD BRCT_TopBP1_rpt2_like 35 110 - -
Pvu2g0808 810 ProSiteProfiles BRCT domain profile. 400 488 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0808 Pvu-Chr2 11639025 11647798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0808 1 807 Core DNA Replication Machinery Family AT1G77320 44.740 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0808 K10728 - gmx:100804966 1265.37