Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0805 ATGAGTCAGCCAGTGGAGGAGGAGAGACCGACAACGAGGCCTGCGCCGCCTTCCGTAGTGTTGGTGATGGGCCTCCCTCAAGACTGCTCCGTCCTCGATCTCAAGTCTCGCTTCGGGATCTATGACGCTATCTCCCGCATCCGCATCGACCGCGATGTCGTTGGCTTCATTACTTACCGGTCAAAGGACTCTTCCAACGCCGCCATAGCCGCCGGTGTTGACCCCTCATTCGGAATCACCGTTAGCTCAAAAAAGGTTCAGGTGTTGTGGGCAACAAATCCTCTAGCGATGTGGAGGGAAGGAGTTGGTAATAGGAAGGATAAAGGTTATATGTCAAAGCTTGTGCGTGCTGAGGCACCTTTGAGCAAGCATGAAAGAGGTAATAGACTTGGTTCCGCTATAGGGAACACTAAACGTGGTGATGAGAATAACTTAGGCAGCTCTGTTTTAGAAGTTCCTTTCAAGGGCCGAGAAATTGTTGCTTATGATGATATCCTCTCACTATCAAAATTTATATTATTAGAGCCTTATCTTATTCTGTATCAGTGA 549 0.4845 MSQPVEEERPTTRPAPPSVVLVMGLPQDCSVLDLKSRFGIYDAISRIRIDRDVVGFITYRSKDSSNAAIAAGVDPSFGITVSSKKVQVLWATNPLAMWREGVGNRKDKGYMSKLVRAEAPLSKHERGNRLGSAIGNTKRGDENNLGSSVLEVPFKGREIVAYDDILSLSKFILLEPYLILYQ* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0805 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 70 IPR000504 GO:0003723
Pvu2g0805 182 CDD RRM_SF 20 71 - -
Pvu2g0805 182 Gene3D - 2 146 IPR012677 -
Pvu2g0805 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 93 IPR000504 GO:0003723
Pvu2g0805 182 SUPERFAMILY RNA-binding domain, RBD 7 99 IPR035979 GO:0003676
Pvu2g0805 182 SMART rrm1_1 19 89 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0805 Pvu-Chr2 11553913 11557683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0805 8 166 Homeobox Transcription Factor Family AT1G27050 46.746 2.25e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0805 - - gmx:100793672 262.307