Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0797 ATGATGTTTCTTCTTCTTGTGAGCCTTGTTGTTTTGCAAGGCTTTGTAATACCAACCTGCTATTGCCAGATCAATAATCCTCAGAATATTGAAACATTTTATCCATTACAAACTTCAGAACCACCCCTCCCAATCCAACCTCCTGATGCACCGTCAGAGCCTCAGGCATCACCACCGTCATCAGGACCAGTGGCTGCAACAAAAGCCTCTTCATCGAACAGTAAGGTAGGAACAGCAGTAGCTGCAACTGCAGCAAGCACTCTTGTTGTTTCTGGTTTGGTTTTCTTCTTGGTTAGAAGGTGCTTCAGAACAAGGAAGAGAAAGGAGACAATAAAGAACGCCGCTTCTGCTGTAGATAGGCGTGTTGCACCTCAGGTAGAGGTGTTTGAGAGAATGGAAGGAAACGTGAAGGGACTGATCCTTGATGAGGATGGTTTGGATGTTATTTATTGGAGAAAACTTGAAGGTAAAAAAATGCCAGAAAAGGGTTTCCAAAGGGAGGTTTTGGATAGCCCCAAAGATAAAGAAGATGATCATGAGGGAAATCCAGGGAAAAGAACTGAATCCATTCAAGAAACTCCTCTTAGAGAGAGATCTTCAACTTCCCACATGAACATATTTCTTCCAGAAGAGTCCTACACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCACTGTTCCTTCATCATCAGTTGGAGGCTCTCCTACACAACCATCTTCTCCTTCCTTTACCCCTTCATCACCAAAACCACTCTCCACTTTTTTCTCAACAATTCCGAACATTACAAATTCTGCAACACCAATAGCCCCTCCAAAAGTACCTGATAAAAAGAATGAAGCTCCAATACCAGCATCAGCACCACCACCTCCTCCACCAATCCTAGATAAAAAGAACTCGCCACAACCACCTCCTCCTCCTCCTCCACCAATCCCTCCAAGAAAGAGTCCTGCACCACCACCTCCTCCGCCAAAGGCAAGTGGTTTGAAGTCGTCATCAAAACCGCCACCTAATCCTATTGAAAGAACAGCAGGTACCACAAGTAAGCAAGGAGACACTTCACCTGAGGTAAAACTTAAGCCATTACATTGGGATAAGGTGAATACCAACCTTGATCACTCTATGGTGTGGGACAAAATAGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAATCTCTCTTCGGGTTAATCGCCACCAACCGAAATGATAGTGCCCCCAAAGAAAATAACTCAACGAGTTCTAGCAGGGATGCTTTGGCTCAATCATCAAATGCCTTCCTTCTTGACCCAAGAAAATCACAAAACATTGCTATTGTTTTGAAATCTCTGACAGTTTCTCGTAAAGAGATTATTGACGCGCTCATTGATGGTCAAGGCCTTAACATAGAAACCATTGAAAAGCTTGGTAGGGTAGCCCCAACAGAAGAAGAGCAATCACTTGTACTTGCGTATGAAGGAGACCCTTCAAAACTTGCTGAAGCCGAATCTTTCTTACGTTACATTCTCAAAGCTGTTCCTTCAGCATTTAAGCGATTGAATGCCTTGCTATTCAGGTTGAATTATGACTCTGACATTCAAGAAATAAAGGAGTTTCTGCAGACCCTTGAGATGGGGTGCAAGGAGCTTCGAAACCAAGGAATGTTTGTGAAACTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGCACTCAGAGGGGTAATGCTCAAGCTTTCAACTTGGATTCTCTAAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTTGTTCGTTCTGAAGGAAAACGTGCTGTTCTGAACCGCAATAGCAGTTTGAGTCGTAGTAGCAGCATGAATAGTAACAACAGTGGAGCGTCTCAGAACTCTCCTTCTTCAAATGAACAAAGACAAAGGGAATATATAACACTAGGATTGCCAGTTGTGGGAGGGATCAGTTCTGAGTTTTCCAACGTGAAGAAAGCTGCGGTTACAGATTACAAAAGTTTTGTTGGTTCAATCTCATCGCTCTCGGCGAGGATTCTTAAAATTCGAGAACTTGTTTCCGAGTGTGGAAGTGATATGGGAGGGAACTTTGGGAGAGAAATGAACCGTTTTCTTGAAAATGCTGAGGAAGAATTGAGATTAGTGAGGGAAGAGCAAACAAGGGTGATGAAAATTGTGAAAAAAACAACAGATTATTATCAAGGAGGAGCTTCAAATGATAGTGTAGATAATCTTTATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCTAAGGTAAATTAA 2364 0.4277 MMFLLLVSLVVLQGFVIPTCYCQINNPQNIETFYPLQTSEPPLPIQPPDAPSEPQASPPSSGPVAATKASSSNSKVGTAVAATAASTLVVSGLVFFLVRRCFRTRKRKETIKNAASAVDRRVAPQVEVFERMEGNVKGLILDEDGLDVIYWRKLEGKKMPEKGFQREVLDSPKDKEDDHEGNPGKRTESIQETPLRERSSTSHMNIFLPEESYTIMRIPPPAPPPTVPSSSVGGSPTQPSSPSFTPSSPKPLSTFFSTIPNITNSATPIAPPKVPDKKNEAPIPASAPPPPPPILDKKNSPQPPPPPPPPIPPRKSPAPPPPPPKASGLKSSSKPPPNPIERTAGTTSKQGDTSPEVKLKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDDLMESLFGLIATNRNDSAPKENNSTSSSRDALAQSSNAFLLDPRKSQNIAIVLKSLTVSRKEIIDALIDGQGLNIETIEKLGRVAPTEEEQSLVLAYEGDPSKLAEAESFLRYILKAVPSAFKRLNALLFRLNYDSDIQEIKEFLQTLEMGCKELRNQGMFVKLLEAVLKAGNRMNAGTQRGNAQAFNLDSLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNSSLSRSSSMNSNNSGASQNSPSSNEQRQREYITLGLPVVGGISSEFSNVKKAAVTDYKSFVGSISSLSARILKIRELVSECGSDMGGNFGREMNRFLENAEEELRLVREEQTRVMKIVKKTTDYYQGGASNDSVDNLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKVN* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0797 787 MobiDBLite consensus disorder prediction 231 268 - -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 194 208 - -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 36 69 - -
Pvu2g0797 787 SMART it6_source 349 782 IPR015425 -
Pvu2g0797 787 Coils Coil 707 734 - -
Pvu2g0797 787 PANTHER FORMIN-LIKE PROTEIN 4 5 785 - -
Pvu2g0797 787 Pfam Formin Homology 2 Domain 353 767 IPR015425 -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 216 230 - -
Pvu2g0797 787 Gene3D Formin, FH2 domain 370 786 IPR042201 -
Pvu2g0797 787 SUPERFAMILY Formin homology 2 domain (FH2 domain) 427 782 - -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 162 193 - -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 40 58 - -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 615 644 - -
Pvu2g0797 787 ProSiteProfiles Formin homology-2 (FH2) domain profile. 349 787 IPR015425 -
Pvu2g0797 787 PANTHER FORMIN-RELATED 5 785 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pvu2g0797 787 Coils Coil 527 547 - -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 275 330 - -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 331 354 - -
Pvu2g0797 787 MobiDBLite consensus disorder prediction 162 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0797 Pvu-Chr2 11444474 11447337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0797 23 783 FH2 protein (formin) Gene Family AT1G70140 44.231 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0797 - - gmx:100780368 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0797 2 11444474 11447337 Pvu2g0797 2 11444474 11447337 ECH
Pvu2g0797 2 11444474 11447337 Pvu3g0580 3 7193391 7196321 PCT