Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0795 ATGGACACAGACGGCTTAGTTTCCTTCGATCATATCTCGCCGGAGGATTCCCACGAGGTTCATGTTTTGGCCGTTGATGACAGCCTCGTCGATCGAAAGGTCATTGAACGCTTGCTCAAAATCTCAGCTTGTAAAGTTACAGCTGTTGATAGTGGAATCAGAGCACTGCAATTTCTGGGGTTGGACGAGCAGAGAAGGACCTCTGAATCTGATGGTTTTGTCCCGAGTTTGAAGGTGGATCTAATTATCACAGACTACTGCATGCCCGAGATGACAGGTTATGAATTGCTCAAGAAAATAAAGGAATCGTCCATGTTCAGGGAAATTCCAGTAGTGATTATGTCTTCTGAAAACATTTTGCCTCGCATAGACAGATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAACCAGTGAAATTATCTGATGTGAAACGGTTGAAGGGGTACATGACAACGAGAGAGGTTAAGGTTGGAAGCCATGACAGAGGAAGTGGTGTTGAGATTAACAACAAAAGAAAGCTGGAAGAAGAGGAAGAGACCTCTGACATGTCATCATCGCCACCGTCCATGTCTACACTTTCATCATCACCGTTCCTTTCATCACCATCATCTTCTCCAACATCTTCACCAACCGTGCTCGCTTCACCAATCAGACGGCTTAAAATGAGCACCATCGATTGA 684 0.4503 MDTDGLVSFDHISPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPSLKVDLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTREVKVGSHDRGSGVEINNKRKLEEEEETSDMSSSPPSMSTLSSSPFLSSPSSSPTSSPTVLASPIRRLKMSTID* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0795 227 CDD REC_typeA_ARR 22 147 - -
Pvu2g0795 227 MobiDBLite consensus disorder prediction 157 181 - -
Pvu2g0795 227 SMART REC_2 20 151 IPR001789 GO:0000160
Pvu2g0795 227 SUPERFAMILY CheY-like 20 146 IPR011006 -
Pvu2g0795 227 Pfam Response regulator receiver domain 22 144 IPR001789 GO:0000160
Pvu2g0795 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 12 224 - -
Pvu2g0795 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 224 IPR045279 GO:0009736
Pvu2g0795 227 MobiDBLite consensus disorder prediction 184 215 - -
Pvu2g0795 227 MobiDBLite consensus disorder prediction 157 227 - -
Pvu2g0795 227 Gene3D - 20 196 - -
Pvu2g0795 227 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0795 Pvu-Chr2 11419098 11420588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0795 14 219 Response Regulator Gene Family AT1G59940 60.094 3.44e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu2g0795 Response_reg 1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0795 K14492 - gmx:100779833 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0795 2 11419098 11420588 Pvu2g0795 2 11419098 11420588 ECH
Pvu2g0795 2 11419098 11420588 Pvu3g0579 3 7164501 7165990 PCT