Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0789 ATGTATGCAATAAAGAGAATTAATTTAACACATATTCCTTCATATAAACATAGTATTGTAGCAGACATGAGTTCGTCCTCAGAGAACAAATCTTCTTCTTCTCCTTCTTCTTCAGTGTTGAAACCATTTGGTTTTCATTCCAGGGCTAGCAACGATGACGATGACAAAGGTGGTAAGAAAATCCAGTGCCCGTTTTGCCATCGCAAATTTCACAATTTGCAAGCAATGGGGGGCCACCAGAATGCACATAGAAGAGAAAGACAAATGGCTAGGTTGGCCCAATTTGAGTACATGCGTGAACATCAAAGAAACCATATATTCCAAGCCGTAACATCTCTTGTGGTTTCACAAGGAGCATCACCAACCTCTGTTTTCGGTGGTGCAACTCGGTTCAGGACAGCACCTGTGGCGGAGCCACCAGGTACGCGCCACCATAACGTACAAGTATCGGTAGTAGGGCTTGACGATGATGTGGATCTAGAACTGAGACTAGCTGTCTCTTCTAAGGAAGCTGGGATGGGAGATATATGA 531 0.4388 MYAIKRINLTHIPSYKHSIVADMSSSSENKSSSSPSSSVLKPFGFHSRASNDDDDKGGKKIQCPFCHRKFHNLQAMGGHQNAHRRERQMARLAQFEYMREHQRNHIFQAVTSLVVSQGASPTSVFGGATRFRTAPVAEPPGTRHHNVQVSVVGLDDDVDLELRLAVSSKEAGMGDI* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0789 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Pvu2g0789 176 PANTHER ZINC FINGER PROTEIN 5 24 123 IPR044299 GO:0010090
Pvu2g0789 176 MobiDBLite consensus disorder prediction 25 44 - -
Pvu2g0789 176 PANTHER ZINC FINGER PROTEIN 6-LIKE 24 123 - -
Pvu2g0789 176 MobiDBLite consensus disorder prediction 25 58 - -
Pvu2g0789 176 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0789 Pvu-Chr2 11284927 11285620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0789 59 116 C2H2 Transcription Factor Family AT1G67030 44.828 4.53e-11 57.4