Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0785 ATGGAAAAGGATATCTGTGATCTTTCTCAAACATGGGATGGTGATAATGGCAACTCTACTGAGAAAAGGCTCAGGTTATTTGGCTTTGAGCTAAACCCTTCTAAAGAGGGCTGTCTCAAAGAGTCTGGTGAAGGAGATGAAAGCGTAAACTCCTCTAACTCAGTCTCATCAGGAGGAGACAAAACTGTGCAAGAAAAGACCTCAGCCAAAGACCCATATGAGAAGAAGTTCGAGTGCCAATACTGTTTCAAAGAATTTGCAAACTCACAAGCATTAGGAGGCCACCAAAATGCTCACAAGAAAGAGAGAATGAAGAAGAAGAGGTTGCAGCTTCAATCTATAAACCGTTACCTCCAACACCCTTTTCAAACCAACCATGGCTTTGCTTACCAAGCCTCTGATAGTCCTTGGTTCTATGACCCCTCTACCTACAATTCTGAGTTCACCCTTTGTGAAGAACCTCAGATTAGCTTCAATTCAAATGTTTTAGATACCAATTTTTCTTGTGACCAGAAATCTAGTTGGTATTCTCTTGCATCACACCCACCTTCACAGCAAGATACCTGCATGTTTACTTTCTCCAATGCAAATAATAACACTCCATTCATCTATAAACCTTGCCACTTCCCTTCTTCAAACCAGAGTCATAGTAAAGCCCTAGATCTTCAACTAGGCCTCAACTTGGAGTCAAATACAAGAAGTTCTCTAAGGAGGATGTAA 720 0.4111 MEKDICDLSQTWDGDNGNSTEKRLRLFGFELNPSKEGCLKESGEGDESVNSSNSVSSGGDKTVQEKTSAKDPYEKKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQSINRYLQHPFQTNHGFAYQASDSPWFYDPSTYNSEFTLCEEPQISFNSNVLDTNFSCDQKSSWYSLASHPPSQQDTCMFTFSNANNNTPFIYKPCHFPSSNQSHSKALDLQLGLNLESNTRSSLRRM* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0785 239 MobiDBLite consensus disorder prediction 45 63 - -
Pvu2g0785 239 PANTHER ZINC FINGER PROTEIN 5 16 228 IPR044299 GO:0010090
Pvu2g0785 239 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Pvu2g0785 239 PANTHER ZINC FINGER PROTEIN 5 16 228 - -
Pvu2g0785 239 Gene3D Classic Zinc Finger 51 128 - -
Pvu2g0785 239 SUPERFAMILY beta-beta-alpha zinc fingers 74 104 IPR036236 -
Pvu2g0785 239 MobiDBLite consensus disorder prediction 34 69 - -
Pvu2g0785 239 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0785 Pvu-Chr2 11146635 11147650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0785 10 113 C2H2 Transcription Factor Family AT5G06650 41.121 2.52e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu2g0785 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0785 - - gmx:100527006 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0785 2 11146635 11147650 Pvu2g0785 2 11146635 11147650 ECH