Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0784 ATGCCGGGGCACCGCTCGAAGTCGGAGAAGCACGACGACGGCGAGAAGCAGCTCCGGCGGGACCCCTACGAGGTCCTTGGAGTCTCGCGCAACTCCATGGATCAGGAAATCAAAACCGCGTACCGCAAAATGGCGCTCAAATATCATCCGGACAAGAATGCAAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGTTACCTTTTCTTACAATATCCTCTCAGATCCTGACAAACGGCGTCAATATGACTCGGCTGGTTTTGAGGCCGTTGAATCAGACAACCAAGAATTGGAGTTAGATCTTTCAAGTTTGGGGGCTGTCAATACAATGTTTGCAGCACTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCCGCATCTGTTTTGGAAGAGGCACTGAATGGTTTAGTGACCATTCGTCCACTTCCGTTAGGACATTATGTATCTAAAAGGGTTGAGAAGCAATGTGCACACTTCTACTCAGTTACAATAACAGAAGAGGAAGCACGAGCTGGATTTGTTTGTCGAGTACTATCATCAGACAAAAGCAAGTTCAAGTTATTATATTTTGATCAGGAAGACAATGGTGGTTTAAGTCTTGCACTCCAGGAAGACAGTGCAAAAACAGGGAAGATTACCACTGCTGGGATGTATTTTCTTGGGTTTCCTGTTTATCGATTGGACCAAACAATGAACTCTATAGCTGCTAAGGATCCAGATACATCTTTTTTCAGAAAGTTGGATGGGTTTCAGCCTTGTGAATTAAATGAATTAAAGGCTGGTACCCATGTATTTGCTGTCTATGGTGACAACTTTTTCAAAAGTGCAAATTATACAATAGAAGCTCTCTGTGCTGCACCTCTTAGTGAAGAAAAAGAAAATTTAAGAAGTATAGAAGCTCAAATCTTGTCTAAAAGGGCCGAAATATCAAAGTTTGAGGCAGAATATCGAGAGGTTCTGGCTCAATTCTCAGAGATGACAAGTAGATATGCACATGAAATTCAATCAATTGACGAGCTACTGAAGCATAGAAATGAAATACATGCATCATACACTATTACTCCCTTTAAACGGAGTACAAGTAAGAGCAGAAGTAAAAGTTCTTCCAAGGAGAACAAAGAAGATGGCCAAACAAGAGAGAAGAGGAGTACAAGAGATCGGCCAAAGAAGAAGAAATGGTATAATCTCCACTTAAGAGTCGATAAGAGAAAGGCTTGCTAA 1227 0.414 MPGHRSKSEKHDDGEKQLRRDPYEVLGVSRNSMDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESDNQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSASVLEEALNGLVTIRPLPLGHYVSKRVEKQCAHFYSVTITEEEARAGFVCRVLSSDKSKFKLLYFDQEDNGGLSLALQEDSAKTGKITTAGMYFLGFPVYRLDQTMNSIAAKDPDTSFFRKLDGFQPCELNELKAGTHVFAVYGDNFFKSANYTIEALCAAPLSEEKENLRSIEAQILSKRAEISKFEAEYREVLAQFSEMTSRYAHEIQSIDELLKHRNEIHASYTITPFKRSTSKSRSKSSSKENKEDGQTREKRSTRDRPKKKKWYNLHLRVDKRKAC* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0784 408 Coils Coil 290 317 - -
Pvu2g0784 408 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 407 - -
Pvu2g0784 408 MobiDBLite consensus disorder prediction 355 396 - -
Pvu2g0784 408 CDD DnaJ 21 75 IPR001623 -
Pvu2g0784 408 SUPERFAMILY Chaperone J-domain 20 90 IPR036869 -
Pvu2g0784 408 MobiDBLite consensus disorder prediction 366 385 - -
Pvu2g0784 408 MobiDBLite consensus disorder prediction 1 23 - -
Pvu2g0784 408 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 407 - -
Pvu2g0784 408 SMART dnaj_3 20 78 IPR001623 -
Pvu2g0784 408 Gene3D DnaJ domain 5 104 IPR036869 -
Pvu2g0784 408 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Pvu2g0784 408 Pfam DnaJ domain 21 83 IPR001623 -
Pvu2g0784 408 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
Pvu2g0784 408 MobiDBLite consensus disorder prediction 1 29 - -
Pvu2g0784 408 PRINTS DnaJ domain signature 23 41 IPR001623 -
Pvu2g0784 408 PRINTS DnaJ domain signature 41 56 IPR001623 -
Pvu2g0784 408 PRINTS DnaJ domain signature 58 78 IPR001623 -
Pvu2g0784 408 PRINTS DnaJ domain signature 78 97 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0784 Pvu-Chr2 11063519 11068141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0784 19 84 C2H2 Transcription Factor Family AT1G74250 42.254 1.32e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0784 - - gmx:100800929 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0784 2 11063519 11068141 Pvu2g0784 2 11063519 11068141 ECH