Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0774 ATGGCAAATGCCACTAATGAAACAACACAAATACAACTTCAAGAAGTGGTAGTTTCAAATGAGGAGGAGAAAGACATTTCCGCCGAGGAATTTGCCACTTGGGACATATGTGAGGCTCTTAAAGAAAAATCAAGAATAGAAGTGAAAGGCATCGCATATTTATACTTAAACAAACAAACATATGAAGAGCGTGCCTGTATCTTTCATCAACAGATACACTCTCTCCCTAAACTCTCCACCACAACTTCCACTTCCGGCGACTTCTCCGATCGTTTGCCGGCGACACCTCATCGGAAGCCATGGCCACGGAATGAGTATCCGCCGATCGCCATGTCGGTCTCCTGCTCCAACTGCCTCCCAGATTCCTTACTTCTCTGCGGCGAGGACTCCTCCGGAGTCTTGTCAGGAGAATCGCCGGGATGTTCATCCGACCTCGATTCCTCGCCGCCGTCGGAGGAGGATTCCATCGCCGGATTCATCGAAGACGAACGACACTTCGTTCCCGGATTCGAATACCTCAACAGGTTCCAATCTCGCTCTCTCGACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTCCAGGCTTGTTACGCTTTTCAACCGCTCACGGCTTATCTTTCCGTTAATTACATGGATCGATTCTTGAATTCTAGAACGTTGCCGCAAACCAATGGGTGGCCATTCCAACTTCTATCAGTTGCGTGCTTGTCTTTGGCGGCAAAGATGGAGGAACCTCTAGTTCCGTCACTGTTGGACCTTCAGGCAGAAGGTGCCAAATACCTATTTGAGCCCAGAACAATTAGAAGAATGGAGCTGCTTGTTCTGAGCGTTTTGGATTGGAGGCTAAGATCGGTTACTCCATTTAGCTTCCTCGATTTCTTTGCGTGCAAGTTAGATTCAACTGGAACTTTTACCGGGTTCCTCATTTCACGTGCTACGCAAATTATCTTATCCAATATCCAAGAGGCTAGTTTTCTTGCCTATTGGCCATCATGCATTGCTGTAGCGGCCATTCTCCATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAGACCCGAGGATGCCGAGTCGTGGTGCGAGGGGCTAATAAAGGAGAAAATTATAGGATGCTACCAATTAATGCAAGAACTTGTGATTGACAATAACCGGAGGAAACCACCTAAAGTGTTACCGCAGCTGCGAGTGACATCTCAGCCCCTTCTAAGATCTAGTGTGTCGTCATTCTCAGCATCATCCTCTTCTCCTTCATCCTCATTGTCTTGTAAAAGGAGGAAATTAAATAACTGTTTATGGGTAGATGATGACAAAGGAAACTCCCAGTGA 1335 0.4697 MANATNETTQIQLQEVVVSNEEEKDISAEEFATWDICEALKEKSRIEVKGIAYLYLNKQTYEERACIFHQQIHSLPKLSTTTSTSGDFSDRLPATPHRKPWPRNEYPPIAMSVSCSNCLPDSLLLCGEDSSGVLSGESPGCSSDLDSSPPSEEDSIAGFIEDERHFVPGFEYLNRFQSRSLDASAREESVAWILKVQACYAFQPLTAYLSVNYMDRFLNSRTLPQTNGWPFQLLSVACLSLAAKMEEPLVPSLLDLQAEGAKYLFEPRTIRRMELLVLSVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAVAAILHAANEIPNWSLVRPEDAESWCEGLIKEKIIGCYQLMQELVIDNNRRKPPKVLPQLRVTSQPLLRSSVSSFSASSSSPSSSLSCKRRKLNNCLWVDDDKGNSQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0774 444 Gene3D - 169 286 - -
Pvu2g0774 444 SMART cyclin_7 191 279 IPR013763 -
Pvu2g0774 444 SMART Cyclin_C_2 288 415 IPR004367 -
Pvu2g0774 444 Pfam Cyclin, N-terminal domain 158 285 IPR006671 -
Pvu2g0774 444 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 111 433 - -
Pvu2g0774 444 Gene3D - 160 348 - -
Pvu2g0774 444 MobiDBLite consensus disorder prediction 79 103 - -
Pvu2g0774 444 ProSitePatterns Cyclins signature. 186 217 IPR006671 -
Pvu2g0774 444 CDD CYCLIN 192 278 IPR013763 -
Pvu2g0774 444 SUPERFAMILY Cyclin-like 146 285 IPR036915 -
Pvu2g0774 444 SUPERFAMILY Cyclin-like 270 389 IPR036915 -
Pvu2g0774 444 Pfam Cyclin, C-terminal domain 288 393 IPR004367 -
Pvu2g0774 444 PANTHER CYCLINS 111 433 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0774 Pvu-Chr2 10835443 10842097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0774 109 444 Core Cell Cycle Gene Families AT1G70210 65.000 5.97e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0774 K18810 - gmx:100780369 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0774 2 10835443 10842097 Pvu2g0774 2 10835443 10842097 ECH
Pvu2g0774 2 10835443 10842097 Pvu3g0568 3 6985124 6987566 PCT