LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g0774	ATGGCAAATGCCACTAATGAAACAACACAAATACAACTTCAAGAAGTGGTAGTTTCAAATGAGGAGGAGAAAGACATTTCCGCCGAGGAATTTGCCACTTGGGACATATGTGAGGCTCTTAAAGAAAAATCAAGAATAGAAGTGAAAGGCATCGCATATTTATACTTAAACAAACAAACATATGAAGAGCGTGCCTGTATCTTTCATCAACAGATACACTCTCTCCCTAAACTCTCCACCACAACTTCCACTTCCGGCGACTTCTCCGATCGTTTGCCGGCGACACCTCATCGGAAGCCATGGCCACGGAATGAGTATCCGCCGATCGCCATGTCGGTCTCCTGCTCCAACTGCCTCCCAGATTCCTTACTTCTCTGCGGCGAGGACTCCTCCGGAGTCTTGTCAGGAGAATCGCCGGGATGTTCATCCGACCTCGATTCCTCGCCGCCGTCGGAGGAGGATTCCATCGCCGGATTCATCGAAGACGAACGACACTTCGTTCCCGGATTCGAATACCTCAACAGGTTCCAATCTCGCTCTCTCGACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTCCAGGCTTGTTACGCTTTTCAACCGCTCACGGCTTATCTTTCCGTTAATTACATGGATCGATTCTTGAATTCTAGAACGTTGCCGCAAACCAATGGGTGGCCATTCCAACTTCTATCAGTTGCGTGCTTGTCTTTGGCGGCAAAGATGGAGGAACCTCTAGTTCCGTCACTGTTGGACCTTCAGGCAGAAGGTGCCAAATACCTATTTGAGCCCAGAACAATTAGAAGAATGGAGCTGCTTGTTCTGAGCGTTTTGGATTGGAGGCTAAGATCGGTTACTCCATTTAGCTTCCTCGATTTCTTTGCGTGCAAGTTAGATTCAACTGGAACTTTTACCGGGTTCCTCATTTCACGTGCTACGCAAATTATCTTATCCAATATCCAAGAGGCTAGTTTTCTTGCCTATTGGCCATCATGCATTGCTGTAGCGGCCATTCTCCATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAGACCCGAGGATGCCGAGTCGTGGTGCGAGGGGCTAATAAAGGAGAAAATTATAGGATGCTACCAATTAATGCAAGAACTTGTGATTGACAATAACCGGAGGAAACCACCTAAAGTGTTACCGCAGCTGCGAGTGACATCTCAGCCCCTTCTAAGATCTAGTGTGTCGTCATTCTCAGCATCATCCTCTTCTCCTTCATCCTCATTGTCTTGTAAAAGGAGGAAATTAAATAACTGTTTATGGGTAGATGATGACAAAGGAAACTCCCAGTGA	1335	0.4697	MANATNETTQIQLQEVVVSNEEEKDISAEEFATWDICEALKEKSRIEVKGIAYLYLNKQTYEERACIFHQQIHSLPKLSTTTSTSGDFSDRLPATPHRKPWPRNEYPPIAMSVSCSNCLPDSLLLCGEDSSGVLSGESPGCSSDLDSSPPSEEDSIAGFIEDERHFVPGFEYLNRFQSRSLDASAREESVAWILKVQACYAFQPLTAYLSVNYMDRFLNSRTLPQTNGWPFQLLSVACLSLAAKMEEPLVPSLLDLQAEGAKYLFEPRTIRRMELLVLSVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAVAAILHAANEIPNWSLVRPEDAESWCEGLIKEKIIGCYQLMQELVIDNNRRKPPKVLPQLRVTSQPLLRSSVSSFSASSSSPSSSLSCKRRKLNNCLWVDDDKGNSQ*	445

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu2g0774	444	Gene3D	-	169	286	-	-
Pvu2g0774	444	SMART	cyclin_7	191	279	IPR013763	-
Pvu2g0774	444	SMART	Cyclin_C_2	288	415	IPR004367	-
Pvu2g0774	444	Pfam	Cyclin, N-terminal domain	158	285	IPR006671	-
Pvu2g0774	444	PANTHER	CARBOXY-TERMINAL DOMAIN CYCLIN	111	433	-	-
Pvu2g0774	444	Gene3D	-	160	348	-	-
Pvu2g0774	444	MobiDBLite	consensus disorder prediction	79	103	-	-
Pvu2g0774	444	ProSitePatterns	Cyclins signature.	186	217	IPR006671	-
Pvu2g0774	444	CDD	CYCLIN	192	278	IPR013763	-
Pvu2g0774	444	SUPERFAMILY	Cyclin-like	146	285	IPR036915	-

Showing 1 to 10 of 13 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g0774	Pvu-Chr2	10835443	10842097	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g0774	109	444	Core Cell Cycle Gene Families	AT1G70210	65.000	5.97e-140	402

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g0774	K18810		-	gmx:100780369	593.578

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g0774	2	10835443	10842097	Pvu2g0774	2	10835443	10842097	ECH
	Pvu2g0774	2	10835443	10842097	Pvu3g0568	3	6985124	6987566	PCT

Showing 1 to 2 of 2 entries

Previous1Next