Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0772 ATGGCACCGAAGCAAACCAAGGCGGAGAAGAAGATCAGTTATGATGGGAAGCTGTGCCAGCTTCTCGATGATTACGGTCAAATCCTCGTGGTCAACGCCGACAACGTTGGATCCAAACAGCTCCAGAACATTCGCAAGGGTCTCCGTGGAGACTCCGTCGTCCTTATGGGGAAGAACACCATGATGAAGCGCTCCGTCAGGATACATGCTGAGAAAACCGGCAACAATGTGTATCTCAGCCTCATCCCTCTCCTTGTCGGCAATGTGGGTTTGATTTTCACTAAGGGTGACTTGAAGGAGGTCAGTGAGGAGGTTGCTAAGTACAAGGTTGGAGCGCCTGCTCGTGTAGGTTTGGTTGCTCCAATTGATGTCGTTGTTCCTCCTGGCAACACTGGTCTCGATCCATCTCAGACTTCTTTCTTCCAGGTCCTTAACATTCCGACCAAGATTAACAAGGGTACTGTGGAAATCATTACCCCCGTGGAACTCATTAGGAAGGGAGAAAAGGTTGGATCTTCCGAAGCTGCATTGCTTGCCAAGCTTGGCATAAGGCCCTTCTCATATGGGCTTGTGGTCCTTTCTGTTTATGATAATGGCTCTGTATTTAGCCCTGAGGTCCTTGATCTTACTGAGGATGACCTCATTGAGAAGTTTGTTTCTGGTGTTTCAATTGTTACTTCTCTATCATTGGCTATCTCATTCCCAACCCTTGCAGCTGCACCACATATGTTTGTGAATGCCTACAAGAATGTTCTATCTGTTGCAGTTGAGACAGATTATTCTTACCCTGAGGCTGACAAGGTCAAGGAGTATCTCAAGGACCCAAGCAAGTTTGCCGTTGCTGCTACTGTGGCTCCTGCTGCTGCCTCTGGTGCTCCAGCTGCTGCAGCAGCCAAGGAAGAGGAAAAGAAGGAAGAGCCAGCTGAAGAATCTGATGATGACATGGGTTTCAGTCTGTTTGACTAA 966 0.4824 MAPKQTKAEKKISYDGKLCQLLDDYGQILVVNADNVGSKQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNNVYLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGEKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFVSGVSIVTSLSLAISFPTLAAAPHMFVNAYKNVLSVAVETDYSYPEADKVKEYLKDPSKFAVAATVAPAAASGAPAAAAAKEEEKKEEPAEESDDDMGFSLFD* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0772 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 321 - -
Pvu2g0772 321 MobiDBLite consensus disorder prediction 293 321 - -
Pvu2g0772 321 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Pvu2g0772 321 Gene3D - 6 209 IPR043141 -
Pvu2g0772 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 321 - -
Pvu2g0772 321 CDD Ribosomal_P0_L10e 9 185 - -
Pvu2g0772 321 Pfam 60s Acidic ribosomal protein 235 320 - -
Pvu2g0772 321 Pfam Ribosomal protein L10 8 108 IPR001790 -
Pvu2g0772 321 Gene3D - 114 185 IPR043164 -
Pvu2g0772 321 MobiDBLite consensus disorder prediction 306 321 - -
Pvu2g0772 321 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Pvu2g0772 321 PIRSF L10E 1 321 IPR030670 GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0772 Pvu-Chr2 10749460 10751879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0772 1 320 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 80.938 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0772 K02941 - gmx:100777482 539.65