Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0747 ATGGCTTCTTCAATGAGGATCTCAAGGCTGCTCTCTCGTTCTTTCCTTCCTGCTTCCACTAATTCTTTGTTTTCTAGAGGTGGAGGTGGAGCTCTTGGTGGAGGACTCAGTAAATTCAGCACTGCTGCTGCCACTGAAGAACCAATTAAACCACCAGTTAGAGTAGAACACACCCAGCTCTTAATTGATGGAAAATTCGTTGATGCTACTTCTGGAAAAACTTTTCCAACGTTGGACCCCAGGACAGGAGATGTGATTGCTCTTGTTGCTGAGGGTGATCATGAAGATGTTGATCAAGCAGTTTCTGTTGCTCGCAAAGCCTTTGACCATGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAGGATATTGCTGCGTGCTGCTGATCTGTTGGAAAAGCACAATGATGAGCTTGCTGCACTTGAGACATGGGATAATGGGAAGCCATACGAACAATCTGCTCAAATCGAAGTCCCAATTGTGGTTCGCCTATTTCGATACTATGCTGGTTGGGCGGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGGCCACATCATGTGCAAACATTGCATGAACCTATTGGTGTGGCCGGTCAGATCATTCCATGGAACTTTCCTCTTCTCATGTTTGCCTGGAAGGTTTGCCCAGCATTGGCCTGTGGTAACACTGTTGTTATCAAAACAGCTGAGCAGACTCCTTTATCTGCTCTCTATGCATCAAAGTTGCTTCATGAGGCTGGACTTCCTCCTGGTGTCCTGAATGTCATATCTGGCTTTGGTCCAACTGCTGGTGCTGCCATTGCCAGTCACATGAACATAGACAAGCTTGCTTTCACTGGTTCAACCGATACTGGAAAAGTTGTCCTTGAACTGGCAGCTAAAAGTAATCTTAAGCCTGTTACTTTGGAGCTTGGTGGCAAATCCCCTTTTATTGTATGTGAAGATGCTGATGTAGATGAGGCTGTTGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCTGGTTCTAGAACATTTGTACACGAACGTGTGTACGATGAATTTATTGAGAAAGCAAGGGCACGTGCTTTGAAACGTGCTGTTGGTGATCCATTCAAAGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATATTGAAGTATATTAGATCTGGTGTTGAAAGTGGAGCTACGCTTGAAACCGGAGGAGATAGATTTGGCAACTCCGGCTTCTATGTTCAACCTACTGTCTTCTCAAATGTAAAGGATGATATGCTGATTGCAAAGGAAACGATATTTGGCCCAGTGCAATCCATATTAAAGTTCAAGGAGCTTGATGAGGTGATTCACAGAGCAAATAACACACACTATGGCCTTGCAGCAGGGGTGTTCACAAAAAACATTAACACGGCAAACACTTTGACTAGAGCATTGAAAGTTGGAACAGTGTGGGTGAACTGCTTTGACGTATTTGATGCTGCAATTCCCTTTGGAGGGTACAAAATGAGTGGTCACGGAAGAGAAAAAGGAGAATACAGTCTCAAGAACTACTTGCAAGTGAAGGCTGTTGTCACATCCTTGAAGAACCCAGCTTGGCTTTGA 1617 0.4434 MASSMRISRLLSRSFLPASTNSLFSRGGGGALGGGLSKFSTAAATEEPIKPPVRVEHTQLLIDGKFVDATSGKTFPTLDPRTGDVIALVAEGDHEDVDQAVSVARKAFDHGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEVPIVVRLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVCPALACGNTVVIKTAEQTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMNIDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKARARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSGFYVQPTVFSNVKDDMLIAKETIFGPVQSILKFKELDEVIHRANNTHYGLAAGVFTKNINTANTLTRALKVGTVWVNCFDVFDAAIPFGGYKMSGHGREKGEYSLKNYLQVKAVVTSLKNPAWL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0747 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 27 538 - -
Pvu2g0747 538 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Pvu2g0747 538 CDD ALDH_F2BC 55 530 - -
Pvu2g0747 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Pvu2g0747 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Pvu2g0747 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Pvu2g0747 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Pvu2g0747 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Pvu2g0747 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 27 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0747 Pvu-Chr2 10112472 10116406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0747 3 538 Aldehyde Dehydrogenase Gene Family AT3G48000 75.419 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0747 K00128 - gmx:100786773 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0747 2 10112472 10116406 Pvu2g0747 2 10112472 10116406 ECH
Pvu2g0747 2 10112472 10116406 Pvu3g0543 3 6528311 6532161 PCT