Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0746 ATGAAATCAAATCAAAACTATCAGATGATCCAAACACAAAAGTCCAACACAAACCTTTCCATGATCCGAAACACAAGCGGGTCGGGTCGCCGGATACTAACATTCCCGGCGGTTCATCCATGCGAAAGCATCGGTCCCTCTATCCTTCTCCCTTCACTCATCACTCTCTGCAACGCCATTTCCTCTTTCCAACACAGGTTCTCGTGTTTCCCTTGCAACAAGCGAAACGCGAGAAACGCGATTCGTTTGACCCTGCTTCTCCAACCTTTCCTTCATGAAATCCGAGACTGCCATTCGGGTCTTCCTGATCCCGCAACCCTGAGCCTCTCCGAACTCCATTTAACCTTCCAGAAGCTTCTTTTCCTTCTTGAAGATCTCTCCCGTGAAGGTGCCAAGCTTTACATGTTGATGGAATCGGATCGGGTTGCCACTCAATTTCGGGTCATATCCAGATCCGTGGCCACTGCATTAGACGTTTTCCCTTTCGGTTCTGTGGAGATCTCAAAGGAAACCAAAGAGCACGTTTTTCTGCTGAATGAACAAGCAAGGAAGGCCATATTTGAATTTGAGGAAGAAGATAAACGGGTTGTGATGAGTGTCGTGTCGGGTTTGACCCGGTTTGAGAATCAGGTTGCTCCGGATGAGGGTGATCTGAAGTGGGTCATTGAGTATATTGGGGTTAAAGGGTGGAGGGAGTGTAACAAGGAGGTGAAGTTTTTGGAGGGAGAAATTGGGTTTAAGGGCTTCAATGAGAAGAGGAATAAGGTGATACTTTTGAGTAGTTTGGTGGGGTTCATGAGTTATTGTAGATGCCTTGTGATGGAGGTTGTTGACTTTGAAGAGAGTGACAAAAAAATTGATGGAAGAGAAAGTAATGTTCAAAGTGAGATGAATCTGAGTTTGAGTTGTCTTAACCCCGATGATTTTCGATGTCCAATCACTTTGGAATTGATGAGTGATCCAGTGACAATAGAGACAGGTCATACGTATGATCGTTCTTCAATTCTGAAGTGGTTCAGAAGTGGGAATTTGACGTGTCCCAACACGGCTAAAAAGCTTATCACCACTGAAATGGTTCCAAACTTGGTGCTTCGGAAGTTGATTCAGCGGTATTGCTTTGCGAATGACATAAGCATTCCCTTTGTTGACTTGGGTCGTAGGAATCGTGAGATTACTAGGAGAGTGGAGCCTGGGAGTGTAGCAGCAGAGGGAGCAATGAGAATGTTGGCTAGTTTTCTGAAAGGAAGGATTGAGAATGGAAGTGGGGAAGAGATGAATAGAGGTGCATTTGAGATAAGGCTTCTTTCAAAGACAAGCATTTTTAATAGGTCTTGTTTGGTGGAAGCTGGTTTGGTGCCTCTTTTGTTGAAGTTGTTGTCATCGAGGGATTCGTTGACTCAAGAGAATGCTGCCGCAGCCCTTCTAAACCTCTCAAAATGTGCAAAGAGTAGAAGTGTGATGGTTGAGAAATGGGGTTTGGAATTAATTGTTGGGGTTTTAAAGAAGGGAGTGAAGATTGAAGCTCGCCAGCATGTTGCTGCTGTGTTGTTTTACCTTAGTGCTGAGTATGGGAACTTGTTAGGGAAAGAGCCAGAAGCAATTCCATCATTGATAAGGCTTGTCAAAGATGGCCCTTATCGGAGCAAGAAAAATGGGTTGGTTGCAATGTTTGGCCTTCTTAAGCACCCTGAAAATCATAGGAGGGTGGTCGAAGGTGGAGCAGTTCCTTTGCTAGTTGGCATCTTGAAAGGATCTGAAAATGAAGACCTTATCACAGATTCACTGGCAGTTCTAGCAACTCTGGCAGAGAAGAGAGAGGGAATGTTTGCAATTCTTCACGAAGAGGCTTTGCATGTAGCTGTTGAAATTTTGAGTTGTTCCACTTCGAGGGTGGGAAGGGAGCACTGTGTGGCCCTATTGCTTTCTTTGTCTCTAAAGGGTGGAGAGGATGTGGTTGCTTATTTAGTGAAGAGTCCTTCTCTTATGGAATCATTGTATTCCCAACTAAGCGCAGGCACATCTAGAGCAAGCAAGAAAGCCAGTGCTCTCATTAGGGTCCTCCATGATTTTTATGAAAGGAGGTCCTCTGGATTTAAGATTTCAGTTATTCCACAAGAACCGTTCATTCATGTTAGGTAA 2139 0.4455 MKSNQNYQMIQTQKSNTNLSMIRNTSGSGRRILTFPAVHPCESIGPSILLPSLITLCNAISSFQHRFSCFPCNKRNARNAIRLTLLLQPFLHEIRDCHSGLPDPATLSLSELHLTFQKLLFLLEDLSREGAKLYMLMESDRVATQFRVISRSVATALDVFPFGSVEISKETKEHVFLLNEQARKAIFEFEEEDKRVVMSVVSGLTRFENQVAPDEGDLKWVIEYIGVKGWRECNKEVKFLEGEIGFKGFNEKRNKVILLSSLVGFMSYCRCLVMEVVDFEESDKKIDGRESNVQSEMNLSLSCLNPDDFRCPITLELMSDPVTIETGHTYDRSSILKWFRSGNLTCPNTAKKLITTEMVPNLVLRKLIQRYCFANDISIPFVDLGRRNREITRRVEPGSVAAEGAMRMLASFLKGRIENGSGEEMNRGAFEIRLLSKTSIFNRSCLVEAGLVPLLLKLLSSRDSLTQENAAAALLNLSKCAKSRSVMVEKWGLELIVGVLKKGVKIEARQHVAAVLFYLSAEYGNLLGKEPEAIPSLIRLVKDGPYRSKKNGLVAMFGLLKHPENHRRVVEGGAVPLLVGILKGSENEDLITDSLAVLATLAEKREGMFAILHEEALHVAVEILSCSTSRVGREHCVALLLSLSLKGGEDVVAYLVKSPSLMESLYSQLSAGTSRASKKASALIRVLHDFYERRSSGFKISVIPQEPFIHVR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0746 712 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 573 616 IPR000225 GO:0005515
Pvu2g0746 712 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 305 379 IPR013083 -
Pvu2g0746 712 SUPERFAMILY RING/U-box 306 377 - -
Pvu2g0746 712 Pfam Armadillo/beta-catenin-like repeat 442 478 IPR000225 GO:0005515
Pvu2g0746 712 Gene3D - 385 694 IPR011989 -
Pvu2g0746 712 Pfam U-box domain 306 374 IPR003613 GO:0004842|GO:0016567
Pvu2g0746 712 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 18 25 700 - -
Pvu2g0746 712 SMART Ubox_2 308 371 IPR003613 GO:0004842|GO:0016567
Pvu2g0746 712 CDD RING-Ubox_PUB 309 351 IPR045210 -
Pvu2g0746 712 ProSiteProfiles U-box domain profile. 304 378 IPR003613 GO:0004842|GO:0016567
Pvu2g0746 712 PANTHER U BOX DOMAIN-CONTAINING 25 700 - -
Pvu2g0746 712 SMART arm_5 438 479 IPR000225 GO:0005515
Pvu2g0746 712 SMART arm_5 562 603 IPR000225 GO:0005515
Pvu2g0746 712 SMART arm_5 480 521 IPR000225 GO:0005515
Pvu2g0746 712 SUPERFAMILY ARM repeat 403 687 IPR016024 -
Pvu2g0746 712 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 450 492 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0746 Pvu-Chr2 10107783 10109921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0746 21 710 U-box Gene Family AT1G60190 44.318 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0746 - - vra:106779024 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0746 2 10107783 10109921 Pvu2g0746 2 10107783 10109921 ECH