Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g0726 | ATGGCCAGCGAGTCGTCGTTTTTGTTTTCCGGCATTCGTTTCGACAGAAAGAAGTTCGGCGCCGATATCGCCAGGTTCCAGAAAAAGGAGAGCGATACTGATTCGGTGAAGATTTGGAGCGTTGCCGAAGACGAAAGCGCGAAAACGAGGGAAGCAGTAGAAGAGAAAACAACCTCCACGAAGAAGAGGAAGCGCAAGGGAAACTCTTCCGAAACTGTTGAAGGATTCAACGTGTTTAGAAATTCCGCATCTGTGGTGCAGTCCAGTGGTGAAGTTCAAGCTGATGAGGAGTCTATTGAGCTGAATAAGAAGAAGAATAAGAAGGAAAAAAATCGTCAACTCGAGCGGGACGCGATATTCAGAAAGCAGCACAACATTCATGTCTCTGGTTATAATGTACCGTCTCCTCTTCAAAACTTTGACGAGTTGAAAACAAGATATAACTGTCCATCGTATTTGTTGCGCAATCTGAAGGAGCTTGGATTCAAACTACCAACGCCTATTCAAAGACAAGCTATTCCAGTACTTTTAGATGGTCGTGAATGCTTTGCGTGTGCACCAACTGGTTCTGGGAAAACCCTTGCATTTGTATGTCCAATGTTAATGAAGCTTAAGGACCCAGAAAGAGGTGGCATTCGAGCTGTCATCCTTTGTCATACCCGTGAATTGTCTGCTCAGATATTTCGAGAGTGCAAAAAGCTTGCCAAAAGAAAAAAATTTCGTATTAAGTTAATGACTAAAAATCTCTTAAGAAATGCTGATTTTTCAAAGTTTCCATGTGATATACTAATATCTACACCACTCCGATTACGCTTGGCTATCAAGAAGAAGAAGATTGATCTCAGCAGAGTTGATTATCTTGTCCTTGATGAATCGGATAAGCTTTTTGAGCCTGAATTATTCAAACAGATTGATTCTGTTCTCAAGGCATGCTCCAACCCATCAATCATACGCTCACTTTTCAGTGCTACTTTACCTGATTTTGTTGAGGATCGAGCTCGAGAACTTATGCATGATGCTGTTCGTGTAATTGTTGGCAGGAAGAATATGGCTTCTGAAACGATAAAGCAAAAATTGGTTTTTACTGGAAGTGAAGAAGGAAAACTTCTTGCAATTCGTCAAAGTTTTGCAGAGAGTCTAAATCCTCCAGTATTGGTTTTTCTCCAAAGCAAGGAACGAGCCAAGGAGCTGTACGGCGAACTTGCATTTGACAACATTAGAGTTGATGTCATTCATTCTGATTTGTCTGAACAAGAGCGAGAAAATGCTGTTGATAACTTCAGAGCTGGAAAAACATGGGTTTTGATTGCTACTGATGTGGTTGCCCGGGGCATGGATTTCAAAGGTGTGAACTGTGTGATCAATTATGATTTCCCTGATTCTGCCTCCGCATATGTCCACAGAATTGGTCGTTCTGGCAGAGCAGGGAGGACTGGAGAAGCGATTACTTTTTACACAGAGGACGACATTCCATTCCTGCGGAATGTTGCTAATCTTATGGCAGCATCGGGCTGTGAAGTTCCATCCTGGCTCATGGAGTTGCAGAAAAAGAAGTGGAAGAAGCACCGACCCAAAAGAGATTCAATCTCCACAAAACCAGAAACAGCATAG | 1611 | 0.4246 | MASESSFLFSGIRFDRKKFGADIARFQKKESDTDSVKIWSVAEDESAKTREAVEEKTTSTKKRKRKGNSSETVEGFNVFRNSASVVQSSGEVQADEESIELNKKKNKKEKNRQLERDAIFRKQHNIHVSGYNVPSPLQNFDELKTRYNCPSYLLRNLKELGFKLPTPIQRQAIPVLLDGRECFACAPTGSGKTLAFVCPMLMKLKDPERGGIRAVILCHTRELSAQIFRECKKLAKRKKFRIKLMTKNLLRNADFSKFPCDILISTPLRLRLAIKKKKIDLSRVDYLVLDESDKLFEPELFKQIDSVLKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASETIKQKLVFTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSEQERENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHRIGRSGRAGRTGEAITFYTEDDIPFLRNVANLMAASGCEVPSWLMELQKKKWKKHRPKRDSISTKPETA* | 537 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g0726 | 536 | MobiDBLite | consensus disorder prediction | 87 | 112 | - | - | |
Pvu2g0726 | 536 | CDD | SF2_C_DEAD | 355 | 485 | - | - | |
Pvu2g0726 | 536 | MobiDBLite | consensus disorder prediction | 96 | 112 | - | - | |
Pvu2g0726 | 536 | CDD | DEADc_DDX52 | 153 | 346 | IPR044764 | GO:0003724|GO:0005524|GO:0030490 | |
Pvu2g0726 | 536 | Gene3D | - | 343 | 520 | IPR027417 | - | |
Pvu2g0726 | 536 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 6 | 533 | - | - | |
Pvu2g0726 | 536 | SMART | ultradead3 | 161 | 358 | IPR014001 | - | |
Pvu2g0726 | 536 | SMART | helicmild6 | 395 | 476 | IPR001650 | - | |
Pvu2g0726 | 536 | Pfam | Helicase conserved C-terminal domain | 373 | 476 | IPR001650 | - | |
Pvu2g0726 | 536 | Gene3D | - | 84 | 342 | IPR027417 | - | |
Pvu2g0726 | 536 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 57 | 6 | 533 | - | - | |
Pvu2g0726 | 536 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 142 | 170 | IPR014014 | GO:0003724 | |
Pvu2g0726 | 536 | MobiDBLite | consensus disorder prediction | 45 | 70 | - | - | |
Pvu2g0726 | 536 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 354 | 515 | IPR001650 | - | |
Pvu2g0726 | 536 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 173 | 488 | IPR027417 | - | |
Pvu2g0726 | 536 | Pfam | DEAD/DEAH box helicase | 166 | 330 | IPR011545 | GO:0003676|GO:0005524 | |
Pvu2g0726 | 536 | MobiDBLite | consensus disorder prediction | 45 | 73 | - | - | |
Pvu2g0726 | 536 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 173 | 343 | IPR014001 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g0726 | Pvu-Chr2 | 9588757 | 9592984 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g0726 | 136 | 514 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 30.446 | 1.22e-52 | 182 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g0726 | K14779 | - | gmx:100800969 | 935.25 |