Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0725 ATGGCGAAAGGTGGAAAACTAATGAAGCTGAAATCAGTGCTGAAGAAATGGAACTCATTCGGTAACGGCAAGCAGAGCCGCCACAGCACCAGCGCCGTCGCGGACGATGAGTCCTCCTCCAGATCGGACCTCCACGCCGTCTACGTCGGCAAGTCCCGGCGCCTCTACCGGGTCTCATCCGGTGTCCTCGACAACCCCGTGTTCCGGGAACTCGTGGAGAGGTCCCGCGACGACTCCGACCACCAAGACGACACCATCAATGTCGCGTGCGAGGTTGTCCTCTTCGAACACTTGCTCTGGATGCTCGATAACGCCGACCCACAACCCGAGTCTCTCAACGAACTCGTGGACTTCTATGCCTGCTAA 366 0.582 MAKGGKLMKLKSVLKKWNSFGNGKQSRHSTSAVADDESSSRSDLHAVYVGKSRRLYRVSSGVLDNPVFRELVERSRDDSDHQDDTINVACEVVLFEHLLWMLDNADPQPESLNELVDFYAC* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0725 121 MobiDBLite consensus disorder prediction 19 42 - -
Pvu2g0725 121 Pfam Auxin responsive protein 10 102 IPR003676 GO:0009733
Pvu2g0725 121 MobiDBLite consensus disorder prediction 19 37 - -
Pvu2g0725 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 121 IPR003676 GO:0009733
Pvu2g0725 121 PANTHER SMALL AUXIN-UP RNA-RELATED 4 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0725 Pvu-Chr2 9582835 9583200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0725 3 106 Calmodulin-binding Proteins AT4G34750 24.762 2.25e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0725 - - ccaj:109809545 207.608