Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0722 ATGTTGGAGTGCTTTCCGGCAATGAAAACCACCTTAAAAGAGCTACACCTTCATCTCTCTATCTCCTTCTTTCTCTTCCTCTCTTATACACTCACAAATTCAGACAGATACACACCAATGTCAACACTCAACCATCTTTTTGATCTTCCTGAACAGATATGTTACGTACAATGTGGATTCTGTACCACTATATTAATGGTAAGTGTCCCATGCAGCAGTTTGTCAATGGTGGTGACAGTAAGATGTGGGCACTGCACAAGCCTCCTTTCTGTTAACATGATGAAAGCTTCTTTTGTCCCTTTCCACCTTTTAGCATCTCTTAGTCATCTTGAGCCAAAAGAAAGTAGTCCAGAACAAGATGCTAACAAGACTTTGAACAGCCACAGTGCATCCCTGATGACCTTTTCTGATTGTGAGGAAGAGGATGTCATTCCAATGAGTAATATTGTGAATAAACCTCCAGAGAAGAGACAGCGAACGCCATCAGCTTATAACTGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCTGAGAACCCTGACATGGCTCACAAAGAAGCTTTTAGTACAGCTGCAAAAAATTGGGCCAATTTTCCCCCAACTCAGTGCAAAGGAGATGATCAAGAGAGCTGTATCCAGACAGATCAACTTGTGGATCTTGATTCCCAAGTGGACCCTCCTGATGCTGAGGTCAATGAAGAAGATGGTCAAGGTTTCCGAGGAAGAAAGGTCCAGAGGAACTCCATCTTTGAAAGGACACCGTTTGAGTGA 771 0.4254 MLECFPAMKTTLKELHLHLSISFFLFLSYTLTNSDRYTPMSTLNHLFDLPEQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLSHLEPKESSPEQDANKTLNSHSASLMTFSDCEEEDVIPMSNIVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFPPTQCKGDDQESCIQTDQLVDLDSQVDPPDAEVNEEDGQGFRGRKVQRNSIFERTPFE* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0722 256 Pfam YABBY protein 50 202 IPR006780 GO:0007275
Pvu2g0722 256 SUPERFAMILY HMG-box 148 201 IPR036910 -
Pvu2g0722 256 MobiDBLite consensus disorder prediction 233 249 - -
Pvu2g0722 256 PANTHER AXIAL REGULATOR YABBY 4 40 221 - -
Pvu2g0722 256 Gene3D High mobility group box domain 147 205 IPR036910 -
Pvu2g0722 256 PANTHER PROTEIN YABBY 6-RELATED 40 221 IPR006780 GO:0007275
Pvu2g0722 256 MobiDBLite consensus disorder prediction 221 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0722 Pvu-Chr2 9554540 9556683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0722 16 256 C2C2-YABBY Transcription Factor Family AT1G23420 56.746 7.38e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pvu2g0722 YABBY 2.2e-62 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0722 K25796 - gmx:100806755 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0722 2 9554540 9556683 Pvu2g0722 2 9554540 9556683 ECH
Pvu2g0722 2 9554540 9556683 Pvu3g0637 3 8393693 8395131 PCT