Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0708 ATGGGTGCTGGTGACTACTACAAGATACTGAAGGTGAAACGTGATGCCACTAATGAAGAGGTGAAGAGGGCTTATAGGAGTTTGGCCATGAAATGGCACCCGGATAAAAACCTTGAAGACCCGCTTAGGAAGGAAGAGTTTGAAGCCAAGTTCAAGCAGGTTGCTGAGGCCTATGATGTGCTCATTGACCCCAAGAAGCGCCAGATCTATGATCTATACGGTCACTATCCCCTTAACTCTCAACGCTTCAGCAAAGAACATGGTAATGGGATTATGAAGGAAGCAGGGGTGGTTGAAAGCAGCTTGACTTGTACCCTTGTGGAGCTTTACAAGGGATGCAAAAAGAAGTTGAAGGTCTCAAGGACTGTTCCTGATGAATTCGGAGTGTCAAAGTCTGTAGAAGAAATCTTGAAGATAAATATTAAACCTGGTTGGAAGAAGGGTACAAAAATCACTTTTCCTGGAAAAGGCAACCAAGAACCAGGTGGTGCTCCAACTGATCTAATTTTTGTTTTGGATGAGAGACCTCATGATATTTTCAAGAGGGATGGAAATGATCTTGTAGTGATCCAGAAGATATCACTTGTAGAGGCTCTAATAGGAAAGACTTTTAACTTGACTACATTGGATGGAAGAGATCTCACAATCCAAGTGACTGATATTGTGAGACCAGGCTTTGAGCTAGTGGTCTCAAATGAAGGTATGCCCATCTCAAAGGAACCTGGCAAGAAAGGAAACCTCAGAATCAAGTTTGATGTTGCGTTTCCATCAAGACTGACCACGCAACAAAAGTCTGGTCTAAGAAGGATTCTTCTTAGTGCTGTTCATTACTAA 834 0.4269 MGAGDYYKILKVKRDATNEEVKRAYRSLAMKWHPDKNLEDPLRKEEFEAKFKQVAEAYDVLIDPKKRQIYDLYGHYPLNSQRFSKEHGNGIMKEAGVVESSLTCTLVELYKGCKKKLKVSRTVPDEFGVSKSVEEILKINIKPGWKKGTKITFPGKGNQEPGGAPTDLIFVLDERPHDIFKRDGNDLVVIQKISLVEALIGKTFNLTTLDGRDLTIQVTDIVRPGFELVVSNEGMPISKEPGKKGNLRIKFDVAFPSRLTTQQKSGLRRILLSAVHY* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0708 277 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 273 - -
Pvu2g0708 277 SUPERFAMILY HSP40/DnaJ peptide-binding domain 180 265 IPR008971 GO:0006457|GO:0051082
Pvu2g0708 277 CDD DnaJ_C 98 259 - -
Pvu2g0708 277 Pfam DnaJ C terminal domain 99 256 IPR002939 -
Pvu2g0708 277 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Pvu2g0708 277 CDD DnaJ 5 63 IPR001623 -
Pvu2g0708 277 Gene3D DnaJ domain 2 96 IPR036869 -
Pvu2g0708 277 Pfam DnaJ domain 5 71 IPR001623 -
Pvu2g0708 277 Gene3D - 177 257 - -
Pvu2g0708 277 SUPERFAMILY Chaperone J-domain 4 82 IPR036869 -
Pvu2g0708 277 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 273 - -
Pvu2g0708 277 SMART dnaj_3 4 66 IPR001623 -
Pvu2g0708 277 SUPERFAMILY HSP40/DnaJ peptide-binding domain 100 178 IPR008971 GO:0006457|GO:0051082
Pvu2g0708 277 Gene3D - 97 175 - -
Pvu2g0708 277 PRINTS DnaJ domain signature 7 25 IPR001623 -
Pvu2g0708 277 PRINTS DnaJ domain signature 25 40 IPR001623 -
Pvu2g0708 277 PRINTS DnaJ domain signature 46 66 IPR001623 -
Pvu2g0708 277 PRINTS DnaJ domain signature 66 85 IPR001623 -
Pvu2g0708 277 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0708 Pvu-Chr2 8457556 8459645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0708 6 73 C2H2 Transcription Factor Family AT1G74250 36.232 3.35e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0708 K09510 - gmx:100778440 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0708 2 8457556 8459645 Pvu2g0708 2 8457556 8459645 ECH
Pvu3g0732 3 10624563 10626888 Pvu2g0708 2 8457556 8459645 PCT